JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:29 5.0KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1mv8a3.name2015-04-17 15:24 0 Job name flag file
[ ]jp_EdMQomm.align2015-04-17 16:29 154KPSIBLAST alignment in FASTA format
[TXT]jp_EdMQomm.als2015-04-17 16:29 3.0KAlscript command file for PS/PDF output
[ ]jp_EdMQomm.blast.gz2015-04-17 16:28 4.1MCompressed PSIBLAST output file
[TXT]jp_EdMQomm.coils.csv2015-04-17 16:29 846 COILS output in CSV format
[ ]jp_EdMQomm.coilseq.lupas_142015-04-17 16:29 5.7KCOILS output, window length 14
[ ]jp_EdMQomm.coilseq.lupas_212015-04-17 16:29 5.7KCOILS output, window length 21
[ ]jp_EdMQomm.coilseq.lupas_282015-04-17 16:29 5.7KCOILS output, window length 28
[ ]jp_EdMQomm.concise2015-04-17 16:29 300KPrediction: coiled-coil, solvent, alignment
[ ]jp_EdMQomm.concise.blc2015-04-17 16:29 154KBLC format prediction and alignment data
[ ]jp_EdMQomm.concise.fasta2015-04-17 16:29 156KPrediction: coiled-coil, solvent, alignment
[ ]jp_EdMQomm.concise.pdf2015-04-17 16:29 2.2KPDF prediction and alignment data
[ ]jp_EdMQomm.concise.ps2015-04-17 16:29 1.3KPrediction: coiled-coil, solvent, alignment
[ ]jp_EdMQomm.fasta2015-04-17 15:24 150 Input query sequence in FASTA format
[ ]jp_EdMQomm.full_MSA.fasta2015-04-17 16:28 9.9MFull MSA before JPred filters in FASTA
[TXT]jp_EdMQomm.full_MSA.fasta.noGaps.html2015-04-17 16:29 2.0MFull MSA before JPred filters in FASTA
[TXT]jp_EdMQomm.full_MSA.fasta.withGaps.html2015-04-17 16:29 32MFull MSA before JPred filters in FASTA
[ ]jp_EdMQomm.hmm2015-04-17 16:29 26KHHMer2 profile of the alignment
[TXT]jp_EdMQomm.html2015-04-17 16:29 360KHTML prediction and alignment data
[ ]jp_EdMQomm.input2015-04-17 15:24 143 Raw input data for analysis
[ ]jp_EdMQomm.jalview2015-04-17 16:29 3.5KJalview annotation file for alignment
[ ]jp_EdMQomm.jnet2015-04-17 16:29 5.0KJnet secondary structure output
[TXT]jp_EdMQomm.profile2015-04-17 16:11 22KPSIBLAST profile from alignment
[ ]jp_EdMQomm.pssm2015-04-17 16:29 29KPSIBLAST PSSM for Jnet
[TXT]jp_EdMQomm.results.html2016-02-15 12:17 65KJPred results page
[TXT]jp_EdMQomm.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_EdMQomm.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_EdMQomm.seq2015-04-17 15:24 150 Sequence data file
[TXT]jp_EdMQomm.simple.html2015-04-17 16:29 1.4KBrief HTML: sequence and prediction only
[TXT]jp_EdMQomm.svg.html2015-04-17 16:29 57KJalview SVG summary of results
[ ]jp_EdMQomm.tar.gz2015-04-17 16:29 7.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.