JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:58 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1n3la_.name2015-04-17 16:39 0 Job name flag file
[ ]jp_Ig8Spgo.align2015-04-17 17:55 308KPSIBLAST alignment in FASTA format
[TXT]jp_Ig8Spgo.als2015-04-17 17:55 4.1KAlscript command file for PS/PDF output
[ ]jp_Ig8Spgo.blast.gz2015-04-17 17:51 16MCompressed PSIBLAST output file
[TXT]jp_Ig8Spgo.coils.csv2015-04-17 17:55 2.0KCOILS output in CSV format
[ ]jp_Ig8Spgo.coilseq.lupas_142015-04-17 17:55 14KCOILS output, window length 14
[ ]jp_Ig8Spgo.coilseq.lupas_212015-04-17 17:55 14KCOILS output, window length 21
[ ]jp_Ig8Spgo.coilseq.lupas_282015-04-17 17:55 14KCOILS output, window length 28
[ ]jp_Ig8Spgo.concise2015-04-17 17:55 613KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ig8Spgo.concise.blc2015-04-17 17:55 308KBLC format prediction and alignment data
[ ]jp_Ig8Spgo.concise.fasta2015-04-17 17:55 311KPrediction: coiled-coil, solvent, alignment
[ ]jp_Ig8Spgo.concise.pdf2015-04-17 17:56 2.1MPDF prediction and alignment data
[ ]jp_Ig8Spgo.concise.ps2015-04-17 17:55 39MPrediction: coiled-coil, solvent, alignment
[ ]jp_Ig8Spgo.fasta2015-04-17 17:22 349 Input query sequence in FASTA format
[ ]jp_Ig8Spgo.full_MSA.fasta2015-04-17 17:53 45MFull MSA before JPred filters in FASTA
[TXT]jp_Ig8Spgo.full_MSA.fasta.noGaps.html2015-04-17 17:57 3.8MFull MSA before JPred filters in FASTA
[TXT]jp_Ig8Spgo.full_MSA.fasta.withGaps.html2015-04-17 17:57 111MFull MSA before JPred filters in FASTA
[ ]jp_Ig8Spgo.hmm2015-04-17 17:55 62KHHMer2 profile of the alignment
[TXT]jp_Ig8Spgo.html2015-04-17 17:55 507KHTML prediction and alignment data
[ ]jp_Ig8Spgo.input2015-04-17 16:39 339 Raw input data for analysis
[ ]jp_Ig8Spgo.jalview2015-04-17 17:55 7.5KJalview annotation file for alignment
[ ]jp_Ig8Spgo.jnet2015-04-17 17:55 12KJnet secondary structure output
[TXT]jp_Ig8Spgo.profile2015-04-17 17:49 53KPSIBLAST profile from alignment
[ ]jp_Ig8Spgo.pssm2015-04-17 17:55 71KPSIBLAST PSSM for Jnet
[TXT]jp_Ig8Spgo.results.html2016-02-15 12:17 141KJPred results page
[TXT]jp_Ig8Spgo.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Ig8Spgo.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Ig8Spgo.seq2015-04-17 16:39 349 Sequence data file
[TXT]jp_Ig8Spgo.simple.html2015-04-17 17:55 2.0KBrief HTML: sequence and prediction only
[TXT]jp_Ig8Spgo.svg.html2015-04-17 17:58 133KJalview SVG summary of results
[ ]jp_Ig8Spgo.tar.gz2015-04-17 17:58 30MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.