JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:28 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1n62a1.name2015-04-17 16:02 0 Job name flag file
[ ]jp_lCzHolZ.align2015-04-17 16:28 72KPSIBLAST alignment in FASTA format
[TXT]jp_lCzHolZ.als2015-04-17 16:28 1.8KAlscript command file for PS/PDF output
[ ]jp_lCzHolZ.blast.gz2015-04-17 16:27 3.3MCompressed PSIBLAST output file
[TXT]jp_lCzHolZ.coils.csv2015-04-17 16:28 522 COILS output in CSV format
[ ]jp_lCzHolZ.coilseq.lupas_142015-04-17 16:28 3.4KCOILS output, window length 14
[ ]jp_lCzHolZ.coilseq.lupas_212015-04-17 16:28 3.4KCOILS output, window length 21
[ ]jp_lCzHolZ.coilseq.lupas_282015-04-17 16:28 3.4KCOILS output, window length 28
[ ]jp_lCzHolZ.concise2015-04-17 16:28 139KPrediction: coiled-coil, solvent, alignment
[ ]jp_lCzHolZ.concise.blc2015-04-17 16:28 72KBLC format prediction and alignment data
[ ]jp_lCzHolZ.concise.fasta2015-04-17 16:28 73KPrediction: coiled-coil, solvent, alignment
[ ]jp_lCzHolZ.concise.pdf2015-04-17 16:28 417KPDF prediction and alignment data
[ ]jp_lCzHolZ.concise.ps2015-04-17 16:28 7.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_lCzHolZ.fasta2015-04-17 16:22 96 Input query sequence in FASTA format
[ ]jp_lCzHolZ.full_MSA.fasta2015-04-17 16:28 6.5MFull MSA before JPred filters in FASTA
[TXT]jp_lCzHolZ.full_MSA.fasta.noGaps.html2015-04-17 16:28 1.5MFull MSA before JPred filters in FASTA
[TXT]jp_lCzHolZ.full_MSA.fasta.withGaps.html2015-04-17 16:28 18MFull MSA before JPred filters in FASTA
[ ]jp_lCzHolZ.hmm2015-04-17 16:28 15KHHMer2 profile of the alignment
[TXT]jp_lCzHolZ.html2015-04-17 16:28 221KHTML prediction and alignment data
[ ]jp_lCzHolZ.input2015-04-17 16:02 89 Raw input data for analysis
[ ]jp_lCzHolZ.jalview2015-04-17 16:28 2.5KJalview annotation file for alignment
[ ]jp_lCzHolZ.jnet2015-04-17 16:28 3.1KJnet secondary structure output
[TXT]jp_lCzHolZ.profile2015-04-17 16:26 13KPSIBLAST profile from alignment
[ ]jp_lCzHolZ.pssm2015-04-17 16:28 18KPSIBLAST PSSM for Jnet
[TXT]jp_lCzHolZ.results.html2016-02-15 12:17 43KJPred results page
[TXT]jp_lCzHolZ.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_lCzHolZ.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_lCzHolZ.seq2015-04-17 16:02 96 Sequence data file
[TXT]jp_lCzHolZ.simple.html2015-04-17 16:28 1.1KBrief HTML: sequence and prediction only
[TXT]jp_lCzHolZ.svg.html2015-04-17 16:28 34KJalview SVG summary of results
[ ]jp_lCzHolZ.tar.gz2015-04-17 16:28 5.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.