A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 21:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1n62b1.name | 2015-04-17 18:28 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_IxyXI9Z.align | 2015-04-17 21:01 | 153K | PSIBLAST alignment in FASTA format |
| jp_IxyXI9Z.als | 2015-04-17 21:01 | 2.6K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_IxyXI9Z.blast.gz | 2015-04-17 21:00 | 5.1M | Compressed PSIBLAST output file |
| jp_IxyXI9Z.coils.csv | 2015-04-17 21:01 | 876 | COILS output in CSV format |
| jp_IxyXI9Z.coilseq.lupas_14 | 2015-04-17 21:01 | 5.9K | COILS output, window length 14 |
| jp_IxyXI9Z.coilseq.lupas_21 | 2015-04-17 21:01 | 5.9K | COILS output, window length 21 |
| jp_IxyXI9Z.coilseq.lupas_28 | 2015-04-17 21:01 | 5.9K | COILS output, window length 28 |
| jp_IxyXI9Z.concise | 2015-04-17 21:01 | 299K | Prediction: coiled-coil, solvent, alignment |
| jp_IxyXI9Z.concise.blc | 2015-04-17 21:01 | 153K | BLC format prediction and alignment data |
| jp_IxyXI9Z.concise.fasta | 2015-04-17 21:01 | 154K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_IxyXI9Z.concise.pdf | 2015-04-17 21:01 | 1.0M | PDF prediction and alignment data |
| jp_IxyXI9Z.concise.ps | 2015-04-17 21:01 | 18M | Prediction: coiled-coil, solvent, alignment |
| jp_IxyXI9Z.fasta | 2015-04-17 20:21 | 155 | Input query sequence in FASTA format |
| jp_IxyXI9Z.full_MSA.fasta | 2015-04-17 21:00 | 8.6M | Full MSA before JPred filters in FASTA |
| jp_IxyXI9Z.full_MSA.fasta.noGaps.html | 2015-04-17 21:02 | 1.8M | Full MSA before JPred filters in FASTA |
| jp_IxyXI9Z.full_MSA.fasta.withGaps.html | 2015-04-17 21:02 | 29M | Full MSA before JPred filters in FASTA |
| jp_IxyXI9Z.hmm | 2015-04-17 21:01 | 26K | HHMer2 profile of the alignment |
| jp_IxyXI9Z.html | 2015-04-17 21:01 | 350K | HTML prediction and alignment data |
| jp_IxyXI9Z.input | 2015-04-17 18:28 | 148 | Raw input data for analysis |
| jp_IxyXI9Z.jalview | 2015-04-17 21:01 | 3.6K | Jalview annotation file for alignment |
| jp_IxyXI9Z.jnet | 2015-04-17 21:01 | 5.2K | Jnet secondary structure output |
| jp_IxyXI9Z.profile | 2015-04-17 20:59 | 23K | PSIBLAST profile from alignment |
| jp_IxyXI9Z.pssm | 2015-04-17 21:01 | 30K | PSIBLAST PSSM for Jnet |
| jp_IxyXI9Z.results.html | 2016-02-15 12:17 | 65K | JPred results page |
| jp_IxyXI9Z.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_IxyXI9Z.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_IxyXI9Z.seq | 2015-04-17 18:28 | 155 | Sequence data file |
| jp_IxyXI9Z.simple.html | 2015-04-17 21:01 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_IxyXI9Z.svg.html) | jp_IxyXI9Z.svg.html | 2015-04-17 21:02 | 57K | Jalview SVG summary of results |
| jp_IxyXI9Z.tar.gz | 2015-04-17 21:02 | 9.5M | Archive containing complete results |
