JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:31 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1ntha_.name2015-04-17 18:28 0 Job name flag file
[ ]jp_J7IBeoU.align2015-04-17 20:31 12KPSIBLAST alignment in FASTA format
[TXT]jp_J7IBeoU.als2015-04-17 20:31 4.9KAlscript command file for PS/PDF output
[ ]jp_J7IBeoU.blast.gz2015-04-17 20:31 44KCompressed PSIBLAST output file
[TXT]jp_J7IBeoU.coils.csv2015-04-17 20:31 2.7KCOILS output in CSV format
[ ]jp_J7IBeoU.coilseq.lupas_142015-04-17 20:31 19KCOILS output, window length 14
[ ]jp_J7IBeoU.coilseq.lupas_212015-04-17 20:31 19KCOILS output, window length 21
[ ]jp_J7IBeoU.coilseq.lupas_282015-04-17 20:31 19KCOILS output, window length 28
[ ]jp_J7IBeoU.concise2015-04-17 20:31 43KPrediction: coiled-coil, solvent, alignment
[ ]jp_J7IBeoU.concise.blc2015-04-17 20:31 19KBLC format prediction and alignment data
[ ]jp_J7IBeoU.concise.fasta2015-04-17 20:31 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_J7IBeoU.concise.pdf2015-04-17 20:31 125KPDF prediction and alignment data
[ ]jp_J7IBeoU.concise.ps2015-04-17 20:31 2.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_J7IBeoU.fasta2015-04-17 20:22 476 Input query sequence in FASTA format
[ ]jp_J7IBeoU.full_MSA.fasta2015-04-17 20:31 41KFull MSA before JPred filters in FASTA
[TXT]jp_J7IBeoU.full_MSA.fasta.noGaps.html2015-04-17 20:31 42KFull MSA before JPred filters in FASTA
[TXT]jp_J7IBeoU.full_MSA.fasta.withGaps.html2015-04-17 20:31 120KFull MSA before JPred filters in FASTA
[ ]jp_J7IBeoU.hmm2015-04-17 20:31 86KHHMer2 profile of the alignment
[TXT]jp_J7IBeoU.html2015-04-17 20:31 62KHTML prediction and alignment data
[ ]jp_J7IBeoU.input2015-04-17 18:28 464 Raw input data for analysis
[ ]jp_J7IBeoU.jalview2015-04-17 20:31 10KJalview annotation file for alignment
[ ]jp_J7IBeoU.jnet2015-04-17 20:31 17KJnet secondary structure output
[TXT]jp_J7IBeoU.profile2015-04-17 20:27 73KPSIBLAST profile from alignment
[ ]jp_J7IBeoU.pssm2015-04-17 20:31 98KPSIBLAST PSSM for Jnet
[TXT]jp_J7IBeoU.results.html2016-02-15 12:17 188KJPred results page
[TXT]jp_J7IBeoU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_J7IBeoU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_J7IBeoU.seq2015-04-17 18:28 476 Sequence data file
[TXT]jp_J7IBeoU.simple.html2015-04-17 20:31 2.4KBrief HTML: sequence and prediction only
[TXT]jp_J7IBeoU.svg.html2015-04-17 20:31 180KJalview SVG summary of results
[ ]jp_J7IBeoU.tar.gz2015-04-17 20:31 315KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.