A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 18:31 | 4.7K | JPred server log file |
| README | 2016-02-15 12:17 | 2.1K | Results file descriptions |
| d1nxja_.name | 2015-04-17 17:17 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_kiCENrd.align | 2015-04-17 18:30 | 152K | PSIBLAST alignment in FASTA format |
| jp_kiCENrd.als | 2015-04-17 18:30 | 3.1K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_kiCENrd.blast.gz | 2015-04-17 18:29 | 2.4M | Compressed PSIBLAST output file |
| jp_kiCENrd.coils.csv | 2015-04-17 18:30 | 966 | COILS output in CSV format |
| jp_kiCENrd.coilseq.lupas_14 | 2015-04-17 18:30 | 6.6K | COILS output, window length 14 |
| jp_kiCENrd.coilseq.lupas_21 | 2015-04-17 18:30 | 6.6K | COILS output, window length 21 |
| jp_kiCENrd.coilseq.lupas_28 | 2015-04-17 18:30 | 6.6K | COILS output, window length 28 |
| jp_kiCENrd.concise | 2015-04-17 18:30 | 296K | Prediction: coiled-coil, solvent, alignment |
| jp_kiCENrd.concise.blc | 2015-04-17 18:30 | 152K | BLC format prediction and alignment data |
| jp_kiCENrd.concise.fasta | 2015-04-17 18:30 | 153K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_kiCENrd.concise.pdf | 2015-04-17 18:30 | 1.1M | PDF prediction and alignment data |
| jp_kiCENrd.concise.ps | 2015-04-17 18:30 | 18M | Prediction: coiled-coil, solvent, alignment |
| jp_kiCENrd.fasta | 2015-04-17 18:24 | 171 | Input query sequence in FASTA format |
| jp_kiCENrd.full_MSA.fasta | 2015-04-17 18:29 | 5.0M | Full MSA before JPred filters in FASTA |
| jp_kiCENrd.full_MSA.fasta.noGaps.html | 2015-04-17 18:31 | 1.0M | Full MSA before JPred filters in FASTA |
| jp_kiCENrd.full_MSA.fasta.withGaps.html | 2015-04-17 18:31 | 16M | Full MSA before JPred filters in FASTA |
| jp_kiCENrd.hmm | 2015-04-17 18:30 | 29K | HHMer2 profile of the alignment |
| jp_kiCENrd.html | 2015-04-17 18:30 | 335K | HTML prediction and alignment data |
| jp_kiCENrd.input | 2015-04-17 17:17 | 163 | Raw input data for analysis |
| jp_kiCENrd.jalview | 2015-04-17 18:30 | 3.9K | Jalview annotation file for alignment |
| jp_kiCENrd.jnet | 2015-04-17 18:30 | 5.7K | Jnet secondary structure output |
| jp_kiCENrd.profile | 2015-04-17 18:27 | 25K | PSIBLAST profile from alignment |
| jp_kiCENrd.pssm | 2015-04-17 18:30 | 34K | PSIBLAST PSSM for Jnet |
| jp_kiCENrd.results.html | 2016-02-15 12:17 | 73K | JPred results page |
| jp_kiCENrd.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_kiCENrd.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_kiCENrd.seq | 2015-04-17 17:17 | 171 | Sequence data file |
| jp_kiCENrd.simple.html | 2015-04-17 18:30 | 1.5K | Brief HTML: sequence and prediction only |
![[TXT]](jp_kiCENrd.svg.html) | jp_kiCENrd.svg.html | 2015-04-17 18:31 | 65K | Jalview SVG summary of results |
| jp_kiCENrd.tar.gz | 2015-04-17 18:31 | 5.5M | Archive containing complete results |
