JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:28 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1nzea_.name2015-04-17 16:03 0 Job name flag file
[ ]jp_3HOvxdz.align2015-04-17 16:27 25KPSIBLAST alignment in FASTA format
[TXT]jp_3HOvxdz.als2015-04-17 16:27 1.9KAlscript command file for PS/PDF output
[ ]jp_3HOvxdz.blast.gz2015-04-17 16:27 69KCompressed PSIBLAST output file
[TXT]jp_3HOvxdz.coils.csv2015-04-17 16:27 702 COILS output in CSV format
[ ]jp_3HOvxdz.coilseq.lupas_142015-04-17 16:27 4.7KCOILS output, window length 14
[ ]jp_3HOvxdz.coilseq.lupas_212015-04-17 16:27 4.7KCOILS output, window length 21
[ ]jp_3HOvxdz.coilseq.lupas_282015-04-17 16:27 4.7KCOILS output, window length 28
[ ]jp_3HOvxdz.concise2015-04-17 16:27 52KPrediction: coiled-coil, solvent, alignment
[ ]jp_3HOvxdz.concise.blc2015-04-17 16:27 26KBLC format prediction and alignment data
[ ]jp_3HOvxdz.concise.fasta2015-04-17 16:27 26KPrediction: coiled-coil, solvent, alignment
[ ]jp_3HOvxdz.concise.pdf2015-04-17 16:27 169KPDF prediction and alignment data
[ ]jp_3HOvxdz.concise.ps2015-04-17 16:27 3.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_3HOvxdz.fasta2015-04-17 16:25 126 Input query sequence in FASTA format
[ ]jp_3HOvxdz.full_MSA.fasta2015-04-17 16:27 97KFull MSA before JPred filters in FASTA
[TXT]jp_3HOvxdz.full_MSA.fasta.noGaps.html2015-04-17 16:27 75KFull MSA before JPred filters in FASTA
[TXT]jp_3HOvxdz.full_MSA.fasta.withGaps.html2015-04-17 16:27 418KFull MSA before JPred filters in FASTA
[ ]jp_3HOvxdz.hmm2015-04-17 16:27 21KHHMer2 profile of the alignment
[TXT]jp_3HOvxdz.html2015-04-17 16:27 77KHTML prediction and alignment data
[ ]jp_3HOvxdz.input2015-04-17 16:03 119 Raw input data for analysis
[ ]jp_3HOvxdz.jalview2015-04-17 16:27 3.1KJalview annotation file for alignment
[ ]jp_3HOvxdz.jnet2015-04-17 16:27 4.2KJnet secondary structure output
[TXT]jp_3HOvxdz.profile2015-04-17 16:27 18KPSIBLAST profile from alignment
[ ]jp_3HOvxdz.pssm2015-04-17 16:27 24KPSIBLAST PSSM for Jnet
[TXT]jp_3HOvxdz.results.html2016-02-15 12:17 54KJPred results page
[TXT]jp_3HOvxdz.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_3HOvxdz.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_3HOvxdz.seq2015-04-17 16:03 126 Sequence data file
[TXT]jp_3HOvxdz.simple.html2015-04-17 16:27 1.2KBrief HTML: sequence and prediction only
[TXT]jp_3HOvxdz.svg.html2015-04-17 16:28 46KJalview SVG summary of results
[ ]jp_3HOvxdz.tar.gz2015-04-17 16:28 350KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.