JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:36 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1o7ja_.name2015-04-17 16:04 0 Job name flag file
[ ]jp_kSrZa3m.align2015-04-17 16:35 317KPSIBLAST alignment in FASTA format
[TXT]jp_kSrZa3m.als2015-04-17 16:35 4.4KAlscript command file for PS/PDF output
[ ]jp_kSrZa3m.blast.gz2015-04-17 16:33 7.0MCompressed PSIBLAST output file
[TXT]jp_kSrZa3m.coils.csv2015-04-17 16:35 1.9KCOILS output in CSV format
[ ]jp_kSrZa3m.coilseq.lupas_142015-04-17 16:35 14KCOILS output, window length 14
[ ]jp_kSrZa3m.coilseq.lupas_212015-04-17 16:35 14KCOILS output, window length 21
[ ]jp_kSrZa3m.coilseq.lupas_282015-04-17 16:35 14KCOILS output, window length 28
[ ]jp_kSrZa3m.concise2015-04-17 16:35 630KPrediction: coiled-coil, solvent, alignment
[ ]jp_kSrZa3m.concise.blc2015-04-17 16:35 318KBLC format prediction and alignment data
[ ]jp_kSrZa3m.concise.fasta2015-04-17 16:35 321KPrediction: coiled-coil, solvent, alignment
[ ]jp_kSrZa3m.concise.pdf2015-04-17 16:35 2.3MPDF prediction and alignment data
[ ]jp_kSrZa3m.concise.ps2015-04-17 16:35 40MPrediction: coiled-coil, solvent, alignment
[ ]jp_kSrZa3m.fasta2015-04-17 16:26 342 Input query sequence in FASTA format
[ ]jp_kSrZa3m.full_MSA.fasta2015-04-17 16:34 13MFull MSA before JPred filters in FASTA
[TXT]jp_kSrZa3m.full_MSA.fasta.noGaps.html2015-04-17 16:36 1.6MFull MSA before JPred filters in FASTA
[TXT]jp_kSrZa3m.full_MSA.fasta.withGaps.html2015-04-17 16:36 39MFull MSA before JPred filters in FASTA
[ ]jp_kSrZa3m.hmm2015-04-17 16:35 61KHHMer2 profile of the alignment
[TXT]jp_kSrZa3m.html2015-04-17 16:35 525KHTML prediction and alignment data
[ ]jp_kSrZa3m.input2015-04-17 16:04 332 Raw input data for analysis
[ ]jp_kSrZa3m.jalview2015-04-17 16:35 7.3KJalview annotation file for alignment
[ ]jp_kSrZa3m.jnet2015-04-17 16:35 12KJnet secondary structure output
[TXT]jp_kSrZa3m.profile2015-04-17 16:31 52KPSIBLAST profile from alignment
[ ]jp_kSrZa3m.pssm2015-04-17 16:35 70KPSIBLAST PSSM for Jnet
[TXT]jp_kSrZa3m.results.html2016-02-15 12:17 137KJPred results page
[TXT]jp_kSrZa3m.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_kSrZa3m.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_kSrZa3m.seq2015-04-17 16:04 342 Sequence data file
[TXT]jp_kSrZa3m.simple.html2015-04-17 16:35 2.1KBrief HTML: sequence and prediction only
[TXT]jp_kSrZa3m.svg.html2015-04-17 16:36 129KJalview SVG summary of results
[ ]jp_kSrZa3m.tar.gz2015-04-17 16:36 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.