JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[ ]jp_jRmS9PF.tar.gz2015-04-17 18:10 217KArchive containing complete results
[TXT]jp_jRmS9PF.svg.html2015-04-17 18:10 16KJalview SVG summary of results
[TXT]jp_jRmS9PF.simple.html2015-04-17 18:10 926 Brief HTML: sequence and prediction only
[ ]jp_jRmS9PF.seq2015-04-17 16:41 50 Sequence data file
[TXT]jp_jRmS9PF.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_jRmS9PF.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_jRmS9PF.results.html2016-02-15 12:17 24KJPred results page
[ ]jp_jRmS9PF.pssm2015-04-17 18:10 7.9KPSIBLAST PSSM for Jnet
[TXT]jp_jRmS9PF.profile2015-04-17 18:07 6.4KPSIBLAST profile from alignment
[ ]jp_jRmS9PF.jnet2015-04-17 18:10 1.4KJnet secondary structure output
[ ]jp_jRmS9PF.jalview2015-04-17 18:10 1.5KJalview annotation file for alignment
[ ]jp_jRmS9PF.input2015-04-17 16:41 44 Raw input data for analysis
[TXT]jp_jRmS9PF.html2015-04-17 18:10 75KHTML prediction and alignment data
[ ]jp_jRmS9PF.hmm2015-04-17 18:10 6.9KHHMer2 profile of the alignment
[TXT]jp_jRmS9PF.full_MSA.fasta.withGaps.html2015-04-17 18:10 554KFull MSA before JPred filters in FASTA
[TXT]jp_jRmS9PF.full_MSA.fasta.noGaps.html2015-04-17 18:10 160KFull MSA before JPred filters in FASTA
[ ]jp_jRmS9PF.full_MSA.fasta2015-04-17 18:10 103KFull MSA before JPred filters in FASTA
[ ]jp_jRmS9PF.fasta2015-04-17 17:23 50 Input query sequence in FASTA format
[ ]jp_jRmS9PF.concise.ps2015-04-17 18:10 1.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_jRmS9PF.concise.pdf2015-04-17 18:10 63KPDF prediction and alignment data
[ ]jp_jRmS9PF.concise.fasta2015-04-17 18:10 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_jRmS9PF.concise.blc2015-04-17 18:10 17KBLC format prediction and alignment data
[ ]jp_jRmS9PF.concise2015-04-17 18:10 31KPrediction: coiled-coil, solvent, alignment
[ ]jp_jRmS9PF.coilseq.lupas_282015-04-17 18:10 1.6KCOILS output, window length 28
[ ]jp_jRmS9PF.coilseq.lupas_212015-04-17 18:10 1.6KCOILS output, window length 21
[ ]jp_jRmS9PF.coilseq.lupas_142015-04-17 18:10 1.6KCOILS output, window length 14
[TXT]jp_jRmS9PF.coils.csv2015-04-17 18:10 252 COILS output in CSV format
[ ]jp_jRmS9PF.blast.gz2015-04-17 18:10 66KCompressed PSIBLAST output file
[TXT]jp_jRmS9PF.als2015-04-17 18:10 1.2KAlscript command file for PS/PDF output
[ ]jp_jRmS9PF.align2015-04-17 18:10 16KPSIBLAST alignment in FASTA format
[TXT]d1oc0b_.name2015-04-17 16:41 0 Job name flag file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]LOG2015-04-17 18:10 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.