JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:23 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1ocya_.name2015-04-17 16:08 0 Job name flag file
[ ]jp_GYvgZlt.align2015-04-17 17:22 234KPSIBLAST alignment in FASTA format
[TXT]jp_GYvgZlt.als2015-04-17 17:22 2.6KAlscript command file for PS/PDF output
[ ]jp_GYvgZlt.blast.gz2015-04-17 17:20 3.0MCompressed PSIBLAST output file
[TXT]jp_GYvgZlt.coils.csv2015-04-17 17:22 1.2KCOILS output in CSV format
[ ]jp_GYvgZlt.coilseq.lupas_142015-04-17 17:22 8.3KCOILS output, window length 14
[ ]jp_GYvgZlt.coilseq.lupas_212015-04-17 17:22 8.3KCOILS output, window length 21
[ ]jp_GYvgZlt.coilseq.lupas_282015-04-17 17:22 8.3KCOILS output, window length 28
[ ]jp_GYvgZlt.concise2015-04-17 17:22 460KPrediction: coiled-coil, solvent, alignment
[ ]jp_GYvgZlt.concise.blc2015-04-17 17:22 234KBLC format prediction and alignment data
[ ]jp_GYvgZlt.concise.fasta2015-04-17 17:22 236KPrediction: coiled-coil, solvent, alignment
[ ]jp_GYvgZlt.concise.pdf2015-04-17 17:22 1.5MPDF prediction and alignment data
[ ]jp_GYvgZlt.concise.ps2015-04-17 17:22 27MPrediction: coiled-coil, solvent, alignment
[ ]jp_GYvgZlt.fasta2015-04-17 16:34 213 Input query sequence in FASTA format
[ ]jp_GYvgZlt.full_MSA.fasta2015-04-17 17:21 7.4MFull MSA before JPred filters in FASTA
[TXT]jp_GYvgZlt.full_MSA.fasta.noGaps.html2015-04-17 17:23 905KFull MSA before JPred filters in FASTA
[TXT]jp_GYvgZlt.full_MSA.fasta.withGaps.html2015-04-17 17:23 19MFull MSA before JPred filters in FASTA
[ ]jp_GYvgZlt.hmm2015-04-17 17:22 37KHHMer2 profile of the alignment
[TXT]jp_GYvgZlt.html2015-04-17 17:22 457KHTML prediction and alignment data
[ ]jp_GYvgZlt.input2015-04-17 16:08 205 Raw input data for analysis
[ ]jp_GYvgZlt.jalview2015-04-17 17:22 4.6KJalview annotation file for alignment
[ ]jp_GYvgZlt.jnet2015-04-17 17:22 7.3KJnet secondary structure output
[TXT]jp_GYvgZlt.profile2015-04-17 17:11 32KPSIBLAST profile from alignment
[ ]jp_GYvgZlt.pssm2015-04-17 17:22 43KPSIBLAST PSSM for Jnet
[TXT]jp_GYvgZlt.results.html2016-02-15 12:17 85KJPred results page
[TXT]jp_GYvgZlt.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_GYvgZlt.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_GYvgZlt.seq2015-04-17 16:08 213 Sequence data file
[TXT]jp_GYvgZlt.simple.html2015-04-17 17:22 1.5KBrief HTML: sequence and prediction only
[TXT]jp_GYvgZlt.svg.html2015-04-17 17:23 77KJalview SVG summary of results
[ ]jp_GYvgZlt.tar.gz2015-04-17 17:23 6.5MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.