JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:54 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1ofza_.name2015-04-17 16:41 0 Job name flag file
[ ]jp_BFjBJke.align2015-04-17 17:53 345KPSIBLAST alignment in FASTA format
[TXT]jp_BFjBJke.als2015-04-17 17:53 4.4KAlscript command file for PS/PDF output
[ ]jp_BFjBJke.blast.gz2015-04-17 17:52 1.0MCompressed PSIBLAST output file
[TXT]jp_BFjBJke.coils.csv2015-04-17 17:53 1.9KCOILS output in CSV format
[ ]jp_BFjBJke.coilseq.lupas_142015-04-17 17:53 13KCOILS output, window length 14
[ ]jp_BFjBJke.coilseq.lupas_212015-04-17 17:53 13KCOILS output, window length 21
[ ]jp_BFjBJke.coilseq.lupas_282015-04-17 17:53 13KCOILS output, window length 28
[ ]jp_BFjBJke.concise2015-04-17 17:53 683KPrediction: coiled-coil, solvent, alignment
[ ]jp_BFjBJke.concise.blc2015-04-17 17:53 344KBLC format prediction and alignment data
[ ]jp_BFjBJke.concise.fasta2015-04-17 17:53 351KPrediction: coiled-coil, solvent, alignment
[ ]jp_BFjBJke.concise.pdf2015-04-17 17:54 1.9MPDF prediction and alignment data
[ ]jp_BFjBJke.concise.ps2015-04-17 17:53 40MPrediction: coiled-coil, solvent, alignment
[ ]jp_BFjBJke.fasta2015-04-17 17:23 329 Input query sequence in FASTA format
[ ]jp_BFjBJke.full_MSA.fasta2015-04-17 17:52 3.9MFull MSA before JPred filters in FASTA
[TXT]jp_BFjBJke.full_MSA.fasta.noGaps.html2015-04-17 17:54 537KFull MSA before JPred filters in FASTA
[TXT]jp_BFjBJke.full_MSA.fasta.withGaps.html2015-04-17 17:54 13MFull MSA before JPred filters in FASTA
[ ]jp_BFjBJke.hmm2015-04-17 17:53 59KHHMer2 profile of the alignment
[TXT]jp_BFjBJke.html2015-04-17 17:53 570KHTML prediction and alignment data
[ ]jp_BFjBJke.input2015-04-17 16:41 319 Raw input data for analysis
[ ]jp_BFjBJke.jalview2015-04-17 17:53 6.9KJalview annotation file for alignment
[ ]jp_BFjBJke.jnet2015-04-17 17:53 11KJnet secondary structure output
[TXT]jp_BFjBJke.profile2015-04-17 17:43 50KPSIBLAST profile from alignment
[ ]jp_BFjBJke.pssm2015-04-17 17:53 67KPSIBLAST PSSM for Jnet
[TXT]jp_BFjBJke.results.html2016-02-15 12:17 129KJPred results page
[TXT]jp_BFjBJke.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_BFjBJke.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_BFjBJke.seq2015-04-17 16:41 329 Sequence data file
[TXT]jp_BFjBJke.simple.html2015-04-17 17:53 2.0KBrief HTML: sequence and prediction only
[TXT]jp_BFjBJke.svg.html2015-04-17 17:54 121KJalview SVG summary of results
[ ]jp_BFjBJke.tar.gz2015-04-17 17:54 4.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.