JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:58 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1okca_.name2015-04-17 16:41 0 Job name flag file
[ ]jp_BLCwTMl.align2015-04-17 17:55 236KPSIBLAST alignment in FASTA format
[TXT]jp_BLCwTMl.als2015-04-17 17:55 3.2KAlscript command file for PS/PDF output
[ ]jp_BLCwTMl.blast.gz2015-04-17 17:44 54MCompressed PSIBLAST output file
[TXT]jp_BLCwTMl.coils.csv2015-04-17 17:55 1.7KCOILS output in CSV format
[ ]jp_BLCwTMl.coilseq.lupas_142015-04-17 17:55 12KCOILS output, window length 14
[ ]jp_BLCwTMl.coilseq.lupas_212015-04-17 17:55 12KCOILS output, window length 21
[ ]jp_BLCwTMl.coilseq.lupas_282015-04-17 17:55 12KCOILS output, window length 28
[ ]jp_BLCwTMl.concise2015-04-17 17:55 471KPrediction: coiled-coil, solvent, alignment
[ ]jp_BLCwTMl.concise.blc2015-04-17 17:55 237KBLC format prediction and alignment data
[ ]jp_BLCwTMl.concise.fasta2015-04-17 17:55 239KPrediction: coiled-coil, solvent, alignment
[ ]jp_BLCwTMl.concise.pdf2015-04-17 17:55 1.7MPDF prediction and alignment data
[ ]jp_BLCwTMl.concise.ps2015-04-17 17:55 30MPrediction: coiled-coil, solvent, alignment
[ ]jp_BLCwTMl.fasta2015-04-17 17:24 309 Input query sequence in FASTA format
[ ]jp_BLCwTMl.full_MSA.fasta2015-04-17 17:52 146MFull MSA before JPred filters in FASTA
[TXT]jp_BLCwTMl.full_MSA.fasta.noGaps.html2015-04-17 17:58 7.9MFull MSA before JPred filters in FASTA
[TXT]jp_BLCwTMl.full_MSA.fasta.withGaps.html2015-04-17 17:58 279MFull MSA before JPred filters in FASTA
[ ]jp_BLCwTMl.hmm2015-04-17 17:55 55KHHMer2 profile of the alignment
[TXT]jp_BLCwTMl.html2015-04-17 17:55 411KHTML prediction and alignment data
[ ]jp_BLCwTMl.input2015-04-17 16:41 299 Raw input data for analysis
[ ]jp_BLCwTMl.jalview2015-04-17 17:55 6.7KJalview annotation file for alignment
[ ]jp_BLCwTMl.jnet2015-04-17 17:55 11KJnet secondary structure output
[TXT]jp_BLCwTMl.profile2015-04-17 17:39 47KPSIBLAST profile from alignment
[ ]jp_BLCwTMl.pssm2015-04-17 17:55 63KPSIBLAST PSSM for Jnet
[TXT]jp_BLCwTMl.results.html2016-02-15 12:17 125KJPred results page
[TXT]jp_BLCwTMl.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_BLCwTMl.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_BLCwTMl.seq2015-04-17 16:41 309 Sequence data file
[TXT]jp_BLCwTMl.simple.html2015-04-17 17:55 1.7KBrief HTML: sequence and prediction only
[TXT]jp_BLCwTMl.svg.html2015-04-17 17:58 117KJalview SVG summary of results
[ ]jp_BLCwTMl.tar.gz2015-04-17 17:59 80MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.