JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:28 4.7KJPred server log file
[TXT]README2016-02-15 12:17 2.1KResults file descriptions
[TXT]d1olza3.name2015-04-17 16:41 0 Job name flag file
[ ]jp_dIih3qx.align2015-04-17 17:28 36KPSIBLAST alignment in FASTA format
[TXT]jp_dIih3qx.als2015-04-17 17:28 1.6KAlscript command file for PS/PDF output
[ ]jp_dIih3qx.blast.gz2015-04-17 17:28 303KCompressed PSIBLAST output file
[TXT]jp_dIih3qx.coils.csv2015-04-17 17:28 366 COILS output in CSV format
[ ]jp_dIih3qx.coilseq.lupas_142015-04-17 17:28 2.4KCOILS output, window length 14
[ ]jp_dIih3qx.coilseq.lupas_212015-04-17 17:28 2.4KCOILS output, window length 21
[ ]jp_dIih3qx.coilseq.lupas_282015-04-17 17:28 2.4KCOILS output, window length 28
[ ]jp_dIih3qx.concise2015-04-17 17:28 69KPrediction: coiled-coil, solvent, alignment
[ ]jp_dIih3qx.concise.blc2015-04-17 17:28 37KBLC format prediction and alignment data
[ ]jp_dIih3qx.concise.fasta2015-04-17 17:28 37KPrediction: coiled-coil, solvent, alignment
[ ]jp_dIih3qx.concise.pdf2015-04-17 17:28 182KPDF prediction and alignment data
[ ]jp_dIih3qx.concise.ps2015-04-17 17:28 3.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_dIih3qx.fasta2015-04-17 17:24 69 Input query sequence in FASTA format
[ ]jp_dIih3qx.full_MSA.fasta2015-04-17 17:28 725KFull MSA before JPred filters in FASTA
[TXT]jp_dIih3qx.full_MSA.fasta.noGaps.html2015-04-17 17:28 432KFull MSA before JPred filters in FASTA
[TXT]jp_dIih3qx.full_MSA.fasta.withGaps.html2015-04-17 17:28 3.4MFull MSA before JPred filters in FASTA
[ ]jp_dIih3qx.hmm2015-04-17 17:28 11KHHMer2 profile of the alignment
[TXT]jp_dIih3qx.html2015-04-17 17:28 135KHTML prediction and alignment data
[ ]jp_dIih3qx.input2015-04-17 16:41 63 Raw input data for analysis
[ ]jp_dIih3qx.jalview2015-04-17 17:28 1.9KJalview annotation file for alignment
[ ]jp_dIih3qx.jnet2015-04-17 17:28 2.1KJnet secondary structure output
[TXT]jp_dIih3qx.profile2015-04-17 17:27 9.4KPSIBLAST profile from alignment
[ ]jp_dIih3qx.pssm2015-04-17 17:28 12KPSIBLAST PSSM for Jnet
[TXT]jp_dIih3qx.results.html2016-02-15 12:17 32KJPred results page
[TXT]jp_dIih3qx.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_dIih3qx.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_dIih3qx.seq2015-04-17 16:41 69 Sequence data file
[TXT]jp_dIih3qx.simple.html2015-04-17 17:28 1.0KBrief HTML: sequence and prediction only
[TXT]jp_dIih3qx.svg.html2015-04-17 17:28 24KJalview SVG summary of results
[ ]jp_dIih3qx.tar.gz2015-04-17 17:28 828KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.