JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_EasZJ_m.tar.gz2015-04-17 17:13 316KArchive containing complete results
[TXT]jp_EasZJ_m.svg.html2015-04-17 17:13 60KJalview SVG summary of results
[TXT]jp_EasZJ_m.simple.html2015-04-17 17:13 1.4KBrief HTML: sequence and prediction only
[ ]jp_EasZJ_m.seq2015-04-17 16:04 159 Sequence data file
[TXT]jp_EasZJ_m.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_EasZJ_m.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_EasZJ_m.results.html2016-02-15 12:18 68KJPred results page
[ ]jp_EasZJ_m.pssm2015-04-17 17:13 31KPSIBLAST PSSM for Jnet
[TXT]jp_EasZJ_m.profile2015-04-17 16:54 23KPSIBLAST profile from alignment
[ ]jp_EasZJ_m.jnet2015-04-17 17:13 5.3KJnet secondary structure output
[ ]jp_EasZJ_m.jalview2015-04-17 17:13 3.7KJalview annotation file for alignment
[ ]jp_EasZJ_m.input2015-04-17 16:04 151 Raw input data for analysis
[TXT]jp_EasZJ_m.html2015-04-17 17:13 56KHTML prediction and alignment data
[ ]jp_EasZJ_m.hmm2015-04-17 17:13 27KHHMer2 profile of the alignment
[TXT]jp_EasZJ_m.full_MSA.fasta.withGaps.html2015-04-17 17:13 451KFull MSA before JPred filters in FASTA
[TXT]jp_EasZJ_m.full_MSA.fasta.noGaps.html2015-04-17 17:13 80KFull MSA before JPred filters in FASTA
[ ]jp_EasZJ_m.full_MSA.fasta2015-04-17 17:13 134KFull MSA before JPred filters in FASTA
[ ]jp_EasZJ_m.fasta2015-04-17 16:26 159 Input query sequence in FASTA format
[ ]jp_EasZJ_m.concise.ps2015-04-17 17:13 2.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_EasZJ_m.concise.pdf2015-04-17 17:13 131KPDF prediction and alignment data
[ ]jp_EasZJ_m.concise.fasta2015-04-17 17:13 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_EasZJ_m.concise.blc2015-04-17 17:13 21KBLC format prediction and alignment data
[ ]jp_EasZJ_m.concise2015-04-17 17:13 42KPrediction: coiled-coil, solvent, alignment
[ ]jp_EasZJ_m.coilseq.lupas_282015-04-17 17:13 6.0KCOILS output, window length 28
[ ]jp_EasZJ_m.coilseq.lupas_212015-04-17 17:13 6.0KCOILS output, window length 21
[ ]jp_EasZJ_m.coilseq.lupas_142015-04-17 17:13 6.0KCOILS output, window length 14
[TXT]jp_EasZJ_m.coils.csv2015-04-17 17:13 894 COILS output in CSV format
[ ]jp_EasZJ_m.blast.gz2015-04-17 17:13 92KCompressed PSIBLAST output file
[TXT]jp_EasZJ_m.als2015-04-17 17:13 2.9KAlscript command file for PS/PDF output
[ ]jp_EasZJ_m.align2015-04-17 17:13 19KPSIBLAST alignment in FASTA format
[TXT]d1oo0a_.name2015-04-17 16:04 0 Job name flag file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]LOG2015-04-17 17:13 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.