JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:31 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1orja_.name2015-04-17 16:05 0 Job name flag file
[ ]jp__slolIH.align2015-04-17 16:31 181KPSIBLAST alignment in FASTA format
[TXT]jp__slolIH.als2015-04-17 16:31 2.0KAlscript command file for PS/PDF output
[ ]jp__slolIH.blast.gz2015-04-17 16:29 563KCompressed PSIBLAST output file
[TXT]jp__slolIH.coils.csv2015-04-17 16:31 786 COILS output in CSV format
[ ]jp__slolIH.coilseq.lupas_142015-04-17 16:31 5.3KCOILS output, window length 14
[ ]jp__slolIH.coilseq.lupas_212015-04-17 16:31 5.3KCOILS output, window length 21
[ ]jp__slolIH.coilseq.lupas_282015-04-17 16:31 5.3KCOILS output, window length 28
[ ]jp__slolIH.concise2015-04-17 16:31 350KPrediction: coiled-coil, solvent, alignment
[ ]jp__slolIH.concise.blc2015-04-17 16:31 180KBLC format prediction and alignment data
[ ]jp__slolIH.concise.fasta2015-04-17 16:31 182KPrediction: coiled-coil, solvent, alignment
[ ]jp__slolIH.concise.pdf2015-04-17 16:31 1.2MPDF prediction and alignment data
[ ]jp__slolIH.concise.ps2015-04-17 16:31 21MPrediction: coiled-coil, solvent, alignment
[ ]jp__slolIH.fasta2015-04-17 16:27 140 Input query sequence in FASTA format
[ ]jp__slolIH.full_MSA.fasta2015-04-17 16:29 709KFull MSA before JPred filters in FASTA
[TXT]jp__slolIH.full_MSA.fasta.noGaps.html2015-04-17 16:31 436KFull MSA before JPred filters in FASTA
[TXT]jp__slolIH.full_MSA.fasta.withGaps.html2015-04-17 16:31 3.8MFull MSA before JPred filters in FASTA
[ ]jp__slolIH.hmm2015-04-17 16:31 24KHHMer2 profile of the alignment
[TXT]jp__slolIH.html2015-04-17 16:31 441KHTML prediction and alignment data
[ ]jp__slolIH.input2015-04-17 16:05 133 Raw input data for analysis
[ ]jp__slolIH.jalview2015-04-17 16:31 3.4KJalview annotation file for alignment
[ ]jp__slolIH.jnet2015-04-17 16:31 4.7KJnet secondary structure output
[TXT]jp__slolIH.profile2015-04-17 16:29 20KPSIBLAST profile from alignment
[ ]jp__slolIH.pssm2015-04-17 16:31 27KPSIBLAST PSSM for Jnet
[TXT]jp__slolIH.results.html2016-02-15 12:18 58KJPred results page
[TXT]jp__slolIH.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp__slolIH.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp__slolIH.seq2015-04-17 16:05 140 Sequence data file
[TXT]jp__slolIH.simple.html2015-04-17 16:31 1.2KBrief HTML: sequence and prediction only
[TXT]jp__slolIH.svg.html2015-04-17 16:31 50KJalview SVG summary of results
[ ]jp__slolIH.tar.gz2015-04-17 16:31 2.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.