JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:26 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1ov9a_.name2015-04-17 17:17 0 Job name flag file
[ ]jp_BqqSYTv.align2015-04-17 18:26 6.4KPSIBLAST alignment in FASTA format
[TXT]jp_BqqSYTv.als2015-04-17 18:26 1.4KAlscript command file for PS/PDF output
[ ]jp_BqqSYTv.blast.gz2015-04-17 18:26 11KCompressed PSIBLAST output file
[TXT]jp_BqqSYTv.coils.csv2015-04-17 18:26 300 COILS output in CSV format
[ ]jp_BqqSYTv.coilseq.lupas_142015-04-17 18:26 1.9KCOILS output, window length 14
[ ]jp_BqqSYTv.coilseq.lupas_212015-04-17 18:26 1.9KCOILS output, window length 21
[ ]jp_BqqSYTv.coilseq.lupas_282015-04-17 18:26 1.9KCOILS output, window length 28
[ ]jp_BqqSYTv.concise2015-04-17 18:26 14KPrediction: coiled-coil, solvent, alignment
[ ]jp_BqqSYTv.concise.blc2015-04-17 18:26 7.0KBLC format prediction and alignment data
[ ]jp_BqqSYTv.concise.fasta2015-04-17 18:26 6.9KPrediction: coiled-coil, solvent, alignment
[ ]jp_BqqSYTv.concise.pdf2015-04-17 18:26 41KPDF prediction and alignment data
[ ]jp_BqqSYTv.concise.ps2015-04-17 18:26 711KPrediction: coiled-coil, solvent, alignment
[ ]jp_BqqSYTv.fasta2015-04-17 18:24 58 Input query sequence in FASTA format
[ ]jp_BqqSYTv.full_MSA.fasta2015-04-17 18:26 10KFull MSA before JPred filters in FASTA
[TXT]jp_BqqSYTv.full_MSA.fasta.noGaps.html2015-04-17 18:26 28KFull MSA before JPred filters in FASTA
[TXT]jp_BqqSYTv.full_MSA.fasta.withGaps.html2015-04-17 18:26 36KFull MSA before JPred filters in FASTA
[ ]jp_BqqSYTv.hmm2015-04-17 18:26 8.4KHHMer2 profile of the alignment
[TXT]jp_BqqSYTv.html2015-04-17 18:26 34KHTML prediction and alignment data
[ ]jp_BqqSYTv.input2015-04-17 17:17 52 Raw input data for analysis
[ ]jp_BqqSYTv.jalview2015-04-17 18:26 1.8KJalview annotation file for alignment
[ ]jp_BqqSYTv.jnet2015-04-17 18:26 1.7KJnet secondary structure output
[TXT]jp_BqqSYTv.profile2015-04-17 18:25 7.6KPSIBLAST profile from alignment
[ ]jp_BqqSYTv.pssm2015-04-17 18:26 9.7KPSIBLAST PSSM for Jnet
[TXT]jp_BqqSYTv.results.html2016-02-15 12:18 28KJPred results page
[TXT]jp_BqqSYTv.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_BqqSYTv.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_BqqSYTv.seq2015-04-17 17:17 58 Sequence data file
[TXT]jp_BqqSYTv.simple.html2015-04-17 18:26 1.0KBrief HTML: sequence and prediction only
[TXT]jp_BqqSYTv.svg.html2015-04-17 18:26 20KJalview SVG summary of results
[ ]jp_BqqSYTv.tar.gz2015-04-17 18:26 83KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.