JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:40 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1owla1.name2015-04-17 19:08 0 Job name flag file
[ ]jp_AX0CXzI.align2015-04-17 21:38 255KPSIBLAST alignment in FASTA format
[TXT]jp_AX0CXzI.als2015-04-17 21:38 3.0KAlscript command file for PS/PDF output
[ ]jp_AX0CXzI.blast.gz2015-04-17 21:36 9.1MCompressed PSIBLAST output file
[TXT]jp_AX0CXzI.coils.csv2015-04-17 21:38 1.6KCOILS output in CSV format
[ ]jp_AX0CXzI.coilseq.lupas_142015-04-17 21:38 11KCOILS output, window length 14
[ ]jp_AX0CXzI.coilseq.lupas_212015-04-17 21:38 11KCOILS output, window length 21
[ ]jp_AX0CXzI.coilseq.lupas_282015-04-17 21:38 11KCOILS output, window length 28
[ ]jp_AX0CXzI.concise2015-04-17 21:38 507KPrediction: coiled-coil, solvent, alignment
[ ]jp_AX0CXzI.concise.blc2015-04-17 21:38 256KBLC format prediction and alignment data
[ ]jp_AX0CXzI.concise.fasta2015-04-17 21:38 258KPrediction: coiled-coil, solvent, alignment
[ ]jp_AX0CXzI.concise.pdf2015-04-17 21:39 1.6MPDF prediction and alignment data
[ ]jp_AX0CXzI.concise.ps2015-04-17 21:38 31MPrediction: coiled-coil, solvent, alignment
[ ]jp_AX0CXzI.fasta2015-04-17 21:28 287 Input query sequence in FASTA format
[ ]jp_AX0CXzI.full_MSA.fasta2015-04-17 21:37 18MFull MSA before JPred filters in FASTA
[TXT]jp_AX0CXzI.full_MSA.fasta.noGaps.html2015-04-17 21:39 2.2MFull MSA before JPred filters in FASTA
[TXT]jp_AX0CXzI.full_MSA.fasta.withGaps.html2015-04-17 21:39 50MFull MSA before JPred filters in FASTA
[ ]jp_AX0CXzI.hmm2015-04-17 21:38 51KHHMer2 profile of the alignment
[TXT]jp_AX0CXzI.html2015-04-17 21:38 449KHTML prediction and alignment data
[ ]jp_AX0CXzI.input2015-04-17 19:08 278 Raw input data for analysis
[ ]jp_AX0CXzI.jalview2015-04-17 21:38 6.2KJalview annotation file for alignment
[ ]jp_AX0CXzI.jnet2015-04-17 21:38 9.9KJnet secondary structure output
[TXT]jp_AX0CXzI.profile2015-04-17 21:34 43KPSIBLAST profile from alignment
[ ]jp_AX0CXzI.pssm2015-04-17 21:38 58KPSIBLAST PSSM for Jnet
[TXT]jp_AX0CXzI.results.html2016-02-15 12:18 116KJPred results page
[TXT]jp_AX0CXzI.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_AX0CXzI.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_AX0CXzI.seq2015-04-17 19:08 287 Sequence data file
[TXT]jp_AX0CXzI.simple.html2015-04-17 21:38 1.7KBrief HTML: sequence and prediction only
[TXT]jp_AX0CXzI.svg.html2015-04-17 21:40 108KJalview SVG summary of results
[ ]jp_AX0CXzI.tar.gz2015-04-17 21:40 16MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.