A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:34 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1ppjc1.name | 2015-04-17 17:18 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_uvvHwgq.align | 2015-04-17 20:34 | 45K | PSIBLAST alignment in FASTA format |
| jp_uvvHwgq.als | 2015-04-17 20:34 | 1.9K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_uvvHwgq.blast.gz | 2015-04-17 20:32 | 2.0M | Compressed PSIBLAST output file |
| jp_uvvHwgq.coils.csv | 2015-04-17 20:34 | 744 | COILS output in CSV format |
| jp_uvvHwgq.coilseq.lupas_14 | 2015-04-17 20:34 | 5.0K | COILS output, window length 14 |
| jp_uvvHwgq.coilseq.lupas_21 | 2015-04-17 20:34 | 5.0K | COILS output, window length 21 |
| jp_uvvHwgq.coilseq.lupas_28 | 2015-04-17 20:34 | 5.0K | COILS output, window length 28 |
| jp_uvvHwgq.concise | 2015-04-17 20:34 | 91K | Prediction: coiled-coil, solvent, alignment |
| jp_uvvHwgq.concise.blc | 2015-04-17 20:34 | 46K | BLC format prediction and alignment data |
| jp_uvvHwgq.concise.fasta | 2015-04-17 20:34 | 46K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_uvvHwgq.concise.pdf | 2015-04-17 20:34 | 311K | PDF prediction and alignment data |
| jp_uvvHwgq.concise.ps | 2015-04-17 20:34 | 5.4M | Prediction: coiled-coil, solvent, alignment |
| jp_uvvHwgq.fasta | 2015-04-17 18:25 | 133 | Input query sequence in FASTA format |
| jp_uvvHwgq.full_MSA.fasta | 2015-04-17 20:34 | 4.0M | Full MSA before JPred filters in FASTA |
| jp_uvvHwgq.full_MSA.fasta.noGaps.html | 2015-04-17 20:34 | 1.5M | Full MSA before JPred filters in FASTA |
| jp_uvvHwgq.full_MSA.fasta.withGaps.html | 2015-04-17 20:34 | 12M | Full MSA before JPred filters in FASTA |
| jp_uvvHwgq.hmm | 2015-04-17 20:34 | 22K | HHMer2 profile of the alignment |
| jp_uvvHwgq.html | 2015-04-17 20:34 | 123K | HTML prediction and alignment data |
| jp_uvvHwgq.input | 2015-04-17 17:18 | 126 | Raw input data for analysis |
| jp_uvvHwgq.jalview | 2015-04-17 20:34 | 3.3K | Jalview annotation file for alignment |
| jp_uvvHwgq.jnet | 2015-04-17 20:34 | 4.4K | Jnet secondary structure output |
| jp_uvvHwgq.profile | 2015-04-17 20:27 | 19K | PSIBLAST profile from alignment |
| jp_uvvHwgq.pssm | 2015-04-17 20:34 | 26K | PSIBLAST PSSM for Jnet |
| jp_uvvHwgq.results.html | 2016-02-15 12:18 | 56K | JPred results page |
| jp_uvvHwgq.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_uvvHwgq.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_uvvHwgq.seq | 2015-04-17 17:18 | 133 | Sequence data file |
| jp_uvvHwgq.simple.html | 2015-04-17 20:34 | 1.2K | Brief HTML: sequence and prediction only |
![[TXT]](jp_uvvHwgq.svg.html) | jp_uvvHwgq.svg.html | 2015-04-17 20:34 | 48K | Jalview SVG summary of results |
| jp_uvvHwgq.tar.gz | 2015-04-17 20:34 | 3.3M | Archive containing complete results |
