JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:38 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1q6za1.name2015-04-17 16:05 0 Job name flag file
[ ]jp_bWOPbBK.align2015-04-17 16:37 156KPSIBLAST alignment in FASTA format
[TXT]jp_bWOPbBK.als2015-04-17 16:37 2.6KAlscript command file for PS/PDF output
[ ]jp_bWOPbBK.blast.gz2015-04-17 16:36 5.2MCompressed PSIBLAST output file
[TXT]jp_bWOPbBK.coils.csv2015-04-17 16:37 1.0KCOILS output in CSV format
[ ]jp_bWOPbBK.coilseq.lupas_142015-04-17 16:37 6.7KCOILS output, window length 14
[ ]jp_bWOPbBK.coilseq.lupas_212015-04-17 16:37 6.7KCOILS output, window length 21
[ ]jp_bWOPbBK.coilseq.lupas_282015-04-17 16:37 6.7KCOILS output, window length 28
[ ]jp_bWOPbBK.concise2015-04-17 16:37 306KPrediction: coiled-coil, solvent, alignment
[ ]jp_bWOPbBK.concise.blc2015-04-17 16:37 156KBLC format prediction and alignment data
[ ]jp_bWOPbBK.concise.fasta2015-04-17 16:37 158KPrediction: coiled-coil, solvent, alignment
[ ]jp_bWOPbBK.concise.pdf2015-04-17 16:38 1.1MPDF prediction and alignment data
[ ]jp_bWOPbBK.concise.ps2015-04-17 16:37 19MPrediction: coiled-coil, solvent, alignment
[ ]jp_bWOPbBK.fasta2015-04-17 16:29 175 Input query sequence in FASTA format
[ ]jp_bWOPbBK.full_MSA.fasta2015-04-17 16:37 10MFull MSA before JPred filters in FASTA
[TXT]jp_bWOPbBK.full_MSA.fasta.noGaps.html2015-04-17 16:38 2.8MFull MSA before JPred filters in FASTA
[TXT]jp_bWOPbBK.full_MSA.fasta.withGaps.html2015-04-17 16:38 46MFull MSA before JPred filters in FASTA
[ ]jp_bWOPbBK.hmm2015-04-17 16:37 30KHHMer2 profile of the alignment
[TXT]jp_bWOPbBK.html2015-04-17 16:37 340KHTML prediction and alignment data
[ ]jp_bWOPbBK.input2015-04-17 16:05 167 Raw input data for analysis
[ ]jp_bWOPbBK.jalview2015-04-17 16:37 4.0KJalview annotation file for alignment
[ ]jp_bWOPbBK.jnet2015-04-17 16:37 5.9KJnet secondary structure output
[TXT]jp_bWOPbBK.profile2015-04-17 16:34 26KPSIBLAST profile from alignment
[ ]jp_bWOPbBK.pssm2015-04-17 16:37 34KPSIBLAST PSSM for Jnet
[TXT]jp_bWOPbBK.results.html2016-02-15 12:18 72KJPred results page
[TXT]jp_bWOPbBK.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_bWOPbBK.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_bWOPbBK.seq2015-04-17 16:05 175 Sequence data file
[TXT]jp_bWOPbBK.simple.html2015-04-17 16:37 1.4KBrief HTML: sequence and prediction only
[TXT]jp_bWOPbBK.svg.html2015-04-17 16:38 64KJalview SVG summary of results
[ ]jp_bWOPbBK.tar.gz2015-04-17 16:38 12MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.