JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d1qd1a1.name2015-04-17 17:55 0 Job name flag file
[ ]jp__2J5TsU.input2015-04-17 17:55 186 Raw input data for analysis
[ ]jp__2J5TsU.fasta2015-04-17 19:27 194 Input query sequence in FASTA format
[ ]jp__2J5TsU.seq2015-04-17 17:55 194 Sequence data file
[TXT]jp__2J5TsU.coils.csv2015-04-17 19:30 1.1KCOILS output in CSV format
[TXT]jp__2J5TsU.simple.html2015-04-17 19:30 1.5KBrief HTML: sequence and prediction only
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]jp__2J5TsU.als2015-04-17 19:30 2.9KAlscript command file for PS/PDF output
[ ]jp__2J5TsU.jalview2015-04-17 19:30 4.4KJalview annotation file for alignment
[TXT]LOG2015-04-17 19:30 4.7KJPred server log file
[ ]jp__2J5TsU.jnet2015-04-17 19:30 6.6KJnet secondary structure output
[ ]jp__2J5TsU.coilseq.lupas_142015-04-17 19:30 7.5KCOILS output, window length 14
[ ]jp__2J5TsU.coilseq.lupas_212015-04-17 19:30 7.5KCOILS output, window length 21
[ ]jp__2J5TsU.coilseq.lupas_282015-04-17 19:30 7.5KCOILS output, window length 28
[TXT]jp__2J5TsU.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp__2J5TsU.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp__2J5TsU.profile2015-04-17 19:29 29KPSIBLAST profile from alignment
[ ]jp__2J5TsU.hmm2015-04-17 19:30 34KHHMer2 profile of the alignment
[ ]jp__2J5TsU.pssm2015-04-17 19:30 38KPSIBLAST PSSM for Jnet
[ ]jp__2J5TsU.align2015-04-17 19:30 66KPSIBLAST alignment in FASTA format
[ ]jp__2J5TsU.concise.blc2015-04-17 19:30 67KBLC format prediction and alignment data
[ ]jp__2J5TsU.concise.fasta2015-04-17 19:30 68KPrediction: coiled-coil, solvent, alignment
[TXT]jp__2J5TsU.svg.html2015-04-17 19:30 72KJalview SVG summary of results
[TXT]jp__2J5TsU.results.html2016-02-15 12:18 81KJPred results page
[ ]jp__2J5TsU.concise2015-04-17 19:30 134KPrediction: coiled-coil, solvent, alignment
[TXT]jp__2J5TsU.html2015-04-17 19:30 148KHTML prediction and alignment data
[TXT]jp__2J5TsU.full_MSA.fasta.noGaps.html2015-04-17 19:30 192KFull MSA before JPred filters in FASTA
[ ]jp__2J5TsU.blast.gz2015-04-17 19:30 370KCompressed PSIBLAST output file
[ ]jp__2J5TsU.concise.pdf2015-04-17 19:30 457KPDF prediction and alignment data
[ ]jp__2J5TsU.full_MSA.fasta2015-04-17 19:30 549KFull MSA before JPred filters in FASTA
[ ]jp__2J5TsU.tar.gz2015-04-17 19:30 1.1MArchive containing complete results
[TXT]jp__2J5TsU.full_MSA.fasta.withGaps.html2015-04-17 19:30 2.0MFull MSA before JPred filters in FASTA
[ ]jp__2J5TsU.concise.ps2015-04-17 19:30 8.1MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.