JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:34 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1qexa_.name2015-04-17 19:09 0 Job name flag file
[ ]jp_jjgZLbD.align2015-04-17 21:33 18KPSIBLAST alignment in FASTA format
[TXT]jp_jjgZLbD.als2015-04-17 21:33 4.6KAlscript command file for PS/PDF output
[ ]jp_jjgZLbD.blast.gz2015-04-17 21:33 40KCompressed PSIBLAST output file
[TXT]jp_jjgZLbD.coils.csv2015-04-17 21:33 1.7KCOILS output in CSV format
[ ]jp_jjgZLbD.coilseq.lupas_142015-04-17 21:33 12KCOILS output, window length 14
[ ]jp_jjgZLbD.coilseq.lupas_212015-04-17 21:33 12KCOILS output, window length 21
[ ]jp_jjgZLbD.coilseq.lupas_282015-04-17 21:33 12KCOILS output, window length 28
[ ]jp_jjgZLbD.concise2015-04-17 21:33 46KPrediction: coiled-coil, solvent, alignment
[ ]jp_jjgZLbD.concise.blc2015-04-17 21:33 22KBLC format prediction and alignment data
[ ]jp_jjgZLbD.concise.fasta2015-04-17 21:33 21KPrediction: coiled-coil, solvent, alignment
[ ]jp_jjgZLbD.concise.pdf2015-04-17 21:33 131KPDF prediction and alignment data
[ ]jp_jjgZLbD.concise.ps2015-04-17 21:33 2.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_jjgZLbD.fasta2015-04-17 21:30 305 Input query sequence in FASTA format
[ ]jp_jjgZLbD.full_MSA.fasta2015-04-17 21:33 65KFull MSA before JPred filters in FASTA
[TXT]jp_jjgZLbD.full_MSA.fasta.noGaps.html2015-04-17 21:33 46KFull MSA before JPred filters in FASTA
[TXT]jp_jjgZLbD.full_MSA.fasta.withGaps.html2015-04-17 21:33 331KFull MSA before JPred filters in FASTA
[ ]jp_jjgZLbD.hmm2015-04-17 21:33 54KHHMer2 profile of the alignment
[TXT]jp_jjgZLbD.html2015-04-17 21:33 54KHTML prediction and alignment data
[ ]jp_jjgZLbD.input2015-04-17 19:09 295 Raw input data for analysis
[ ]jp_jjgZLbD.jalview2015-04-17 21:33 6.6KJalview annotation file for alignment
[ ]jp_jjgZLbD.jnet2015-04-17 21:33 11KJnet secondary structure output
[TXT]jp_jjgZLbD.profile2015-04-17 21:32 46KPSIBLAST profile from alignment
[ ]jp_jjgZLbD.pssm2015-04-17 21:33 62KPSIBLAST PSSM for Jnet
[TXT]jp_jjgZLbD.results.html2016-02-15 12:18 124KJPred results page
[TXT]jp_jjgZLbD.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_jjgZLbD.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_jjgZLbD.seq2015-04-17 19:09 305 Sequence data file
[TXT]jp_jjgZLbD.simple.html2015-04-17 21:33 2.0KBrief HTML: sequence and prediction only
[TXT]jp_jjgZLbD.svg.html2015-04-17 21:33 116KJalview SVG summary of results
[ ]jp_jjgZLbD.tar.gz2015-04-17 21:34 284KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.