JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:33 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1qf8a_.name2015-04-17 15:28 0 Job name flag file
[ ]jp_2JrJHnt.align2015-04-17 15:33 61KPSIBLAST alignment in FASTA format
[TXT]jp_2JrJHnt.als2015-04-17 15:33 2.7KAlscript command file for PS/PDF output
[ ]jp_2JrJHnt.blast.gz2015-04-17 15:33 584KCompressed PSIBLAST output file
[TXT]jp_2JrJHnt.coils.csv2015-04-17 15:33 1.0KCOILS output in CSV format
[ ]jp_2JrJHnt.coilseq.lupas_142015-04-17 15:33 7.0KCOILS output, window length 14
[ ]jp_2JrJHnt.coilseq.lupas_212015-04-17 15:33 7.0KCOILS output, window length 21
[ ]jp_2JrJHnt.coilseq.lupas_282015-04-17 15:33 7.0KCOILS output, window length 28
[ ]jp_2JrJHnt.concise2015-04-17 15:33 125KPrediction: coiled-coil, solvent, alignment
[ ]jp_2JrJHnt.concise.blc2015-04-17 15:33 63KBLC format prediction and alignment data
[ ]jp_2JrJHnt.concise.fasta2015-04-17 15:33 63KPrediction: coiled-coil, solvent, alignment
[ ]jp_2JrJHnt.concise.pdf2015-04-17 15:33 417KPDF prediction and alignment data
[ ]jp_2JrJHnt.concise.ps2015-04-17 15:33 7.4MPrediction: coiled-coil, solvent, alignment
[ ]jp_2JrJHnt.fasta2015-04-17 15:30 182 Input query sequence in FASTA format
[ ]jp_2JrJHnt.full_MSA.fasta2015-04-17 15:33 877KFull MSA before JPred filters in FASTA
[TXT]jp_2JrJHnt.full_MSA.fasta.noGaps.html2015-04-17 15:33 238KFull MSA before JPred filters in FASTA
[TXT]jp_2JrJHnt.full_MSA.fasta.withGaps.html2015-04-17 15:33 2.3MFull MSA before JPred filters in FASTA
[ ]jp_2JrJHnt.hmm2015-04-17 15:33 31KHHMer2 profile of the alignment
[TXT]jp_2JrJHnt.html2015-04-17 15:33 140KHTML prediction and alignment data
[ ]jp_2JrJHnt.input2015-04-17 15:28 174 Raw input data for analysis
[ ]jp_2JrJHnt.jalview2015-04-17 15:33 4.1KJalview annotation file for alignment
[ ]jp_2JrJHnt.jnet2015-04-17 15:33 6.1KJnet secondary structure output
[TXT]jp_2JrJHnt.profile2015-04-17 15:32 27KPSIBLAST profile from alignment
[ ]jp_2JrJHnt.pssm2015-04-17 15:33 36KPSIBLAST PSSM for Jnet
[TXT]jp_2JrJHnt.results.html2016-02-15 12:18 76KJPred results page
[TXT]jp_2JrJHnt.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_2JrJHnt.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_2JrJHnt.seq2015-04-17 15:28 182 Sequence data file
[TXT]jp_2JrJHnt.simple.html2015-04-17 15:33 1.4KBrief HTML: sequence and prediction only
[TXT]jp_2JrJHnt.svg.html2015-04-17 15:33 68KJalview SVG summary of results
[ ]jp_2JrJHnt.tar.gz2015-04-17 15:33 1.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.