JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:43 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1qksa2.name2015-04-17 18:30 0 Job name flag file
[ ]jp_02if9hr.align2015-04-17 20:41 161KPSIBLAST alignment in FASTA format
[TXT]jp_02if9hr.als2015-04-17 20:41 6.7KAlscript command file for PS/PDF output
[ ]jp_02if9hr.blast.gz2015-04-17 20:34 16MCompressed PSIBLAST output file
[TXT]jp_02if9hr.coils.csv2015-04-17 20:41 2.6KCOILS output in CSV format
[ ]jp_02if9hr.coilseq.lupas_142015-04-17 20:41 18KCOILS output, window length 14
[ ]jp_02if9hr.coilseq.lupas_212015-04-17 20:41 18KCOILS output, window length 21
[ ]jp_02if9hr.coilseq.lupas_282015-04-17 20:41 18KCOILS output, window length 28
[ ]jp_02if9hr.concise2015-04-17 20:41 333KPrediction: coiled-coil, solvent, alignment
[ ]jp_02if9hr.concise.blc2015-04-17 20:41 166KBLC format prediction and alignment data
[ ]jp_02if9hr.concise.fasta2015-04-17 20:41 166KPrediction: coiled-coil, solvent, alignment
[ ]jp_02if9hr.concise.pdf2015-04-17 20:41 1.0MPDF prediction and alignment data
[ ]jp_02if9hr.concise.ps2015-04-17 20:41 20MPrediction: coiled-coil, solvent, alignment
[ ]jp_02if9hr.fasta2015-04-17 20:24 451 Input query sequence in FASTA format
[ ]jp_02if9hr.full_MSA.fasta2015-04-17 20:38 93MFull MSA before JPred filters in FASTA
[TXT]jp_02if9hr.full_MSA.fasta.noGaps.html2015-04-17 20:43 7.0MFull MSA before JPred filters in FASTA
[TXT]jp_02if9hr.full_MSA.fasta.withGaps.html2015-04-17 20:43 221MFull MSA before JPred filters in FASTA
[ ]jp_02if9hr.hmm2015-04-17 20:41 81KHHMer2 profile of the alignment
[TXT]jp_02if9hr.html2015-04-17 20:41 266KHTML prediction and alignment data
[ ]jp_02if9hr.input2015-04-17 18:30 439 Raw input data for analysis
[ ]jp_02if9hr.jalview2015-04-17 20:41 9.4KJalview annotation file for alignment
[ ]jp_02if9hr.jnet2015-04-17 20:41 16KJnet secondary structure output
[TXT]jp_02if9hr.profile2015-04-17 20:29 69KPSIBLAST profile from alignment
[ ]jp_02if9hr.pssm2015-04-17 20:41 93KPSIBLAST PSSM for Jnet
[TXT]jp_02if9hr.results.html2016-02-15 12:18 179KJPred results page
[TXT]jp_02if9hr.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_02if9hr.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_02if9hr.seq2015-04-17 18:30 451 Sequence data file
[TXT]jp_02if9hr.simple.html2015-04-17 20:41 2.7KBrief HTML: sequence and prediction only
[TXT]jp_02if9hr.svg.html2015-04-17 20:43 171KJalview SVG summary of results
[ ]jp_02if9hr.tar.gz2015-04-17 20:44 33MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.