JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:07 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1qsaa1.name2015-04-17 16:24 0 Job name flag file
[ ]jp_jwTs2Gf.align2015-04-17 17:06 484KPSIBLAST alignment in FASTA format
[TXT]jp_jwTs2Gf.als2015-04-17 17:06 5.9KAlscript command file for PS/PDF output
[ ]jp_jwTs2Gf.blast.gz2015-04-17 17:04 2.5MCompressed PSIBLAST output file
[TXT]jp_jwTs2Gf.coils.csv2015-04-17 17:06 2.7KCOILS output in CSV format
[ ]jp_jwTs2Gf.coilseq.lupas_142015-04-17 17:06 19KCOILS output, window length 14
[ ]jp_jwTs2Gf.coilseq.lupas_212015-04-17 17:06 19KCOILS output, window length 21
[ ]jp_jwTs2Gf.coilseq.lupas_282015-04-17 17:06 19KCOILS output, window length 28
[ ]jp_jwTs2Gf.concise2015-04-17 17:06 963KPrediction: coiled-coil, solvent, alignment
[ ]jp_jwTs2Gf.concise.blc2015-04-17 17:06 484KBLC format prediction and alignment data
[ ]jp_jwTs2Gf.concise.fasta2015-04-17 17:06 489KPrediction: coiled-coil, solvent, alignment
[ ]jp_jwTs2Gf.concise.pdf2015-04-17 17:07 3.3MPDF prediction and alignment data
[ ]jp_jwTs2Gf.concise.ps2015-04-17 17:06 61MPrediction: coiled-coil, solvent, alignment
[ ]jp_jwTs2Gf.fasta2015-04-17 16:54 469 Input query sequence in FASTA format
[ ]jp_jwTs2Gf.full_MSA.fasta2015-04-17 17:04 4.8MFull MSA before JPred filters in FASTA
[TXT]jp_jwTs2Gf.full_MSA.fasta.noGaps.html2015-04-17 17:07 795KFull MSA before JPred filters in FASTA
[TXT]jp_jwTs2Gf.full_MSA.fasta.withGaps.html2015-04-17 17:07 18MFull MSA before JPred filters in FASTA
[ ]jp_jwTs2Gf.hmm2015-04-17 17:06 84KHHMer2 profile of the alignment
[TXT]jp_jwTs2Gf.html2015-04-17 17:06 728KHTML prediction and alignment data
[ ]jp_jwTs2Gf.input2015-04-17 16:24 457 Raw input data for analysis
[ ]jp_jwTs2Gf.jalview2015-04-17 17:06 10KJalview annotation file for alignment
[ ]jp_jwTs2Gf.jnet2015-04-17 17:06 16KJnet secondary structure output
[TXT]jp_jwTs2Gf.profile2015-04-17 16:59 72KPSIBLAST profile from alignment
[ ]jp_jwTs2Gf.pssm2015-04-17 17:06 97KPSIBLAST PSSM for Jnet
[TXT]jp_jwTs2Gf.results.html2016-02-15 12:18 192KJPred results page
[TXT]jp_jwTs2Gf.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_jwTs2Gf.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_jwTs2Gf.seq2015-04-17 16:24 469 Sequence data file
[TXT]jp_jwTs2Gf.simple.html2015-04-17 17:06 2.5KBrief HTML: sequence and prediction only
[TXT]jp_jwTs2Gf.svg.html2015-04-17 17:07 184KJalview SVG summary of results
[ ]jp_jwTs2Gf.tar.gz2015-04-17 17:07 8.3MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.