JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:32 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1r0da_.name2015-04-17 17:19 0 Job name flag file
[ ]jp_kx6RDog.align2015-04-17 20:31 59KPSIBLAST alignment in FASTA format
[TXT]jp_kx6RDog.als2015-04-17 20:31 2.0KAlscript command file for PS/PDF output
[ ]jp_kx6RDog.blast.gz2015-04-17 20:31 447KCompressed PSIBLAST output file
[TXT]jp_kx6RDog.coils.csv2015-04-17 20:31 1.2KCOILS output in CSV format
[ ]jp_kx6RDog.coilseq.lupas_142015-04-17 20:31 8.1KCOILS output, window length 14
[ ]jp_kx6RDog.coilseq.lupas_212015-04-17 20:31 8.1KCOILS output, window length 21
[ ]jp_kx6RDog.coilseq.lupas_282015-04-17 20:31 8.1KCOILS output, window length 28
[ ]jp_kx6RDog.concise2015-04-17 20:31 123KPrediction: coiled-coil, solvent, alignment
[ ]jp_kx6RDog.concise.blc2015-04-17 20:31 62KBLC format prediction and alignment data
[ ]jp_kx6RDog.concise.fasta2015-04-17 20:31 62KPrediction: coiled-coil, solvent, alignment
[ ]jp_kx6RDog.concise.pdf2015-04-17 20:32 360KPDF prediction and alignment data
[ ]jp_kx6RDog.concise.ps2015-04-17 20:31 7.1MPrediction: coiled-coil, solvent, alignment
[ ]jp_kx6RDog.fasta2015-04-17 18:25 209 Input query sequence in FASTA format
[ ]jp_kx6RDog.full_MSA.fasta2015-04-17 20:31 850KFull MSA before JPred filters in FASTA
[TXT]jp_kx6RDog.full_MSA.fasta.noGaps.html2015-04-17 20:32 250KFull MSA before JPred filters in FASTA
[TXT]jp_kx6RDog.full_MSA.fasta.withGaps.html2015-04-17 20:32 3.0MFull MSA before JPred filters in FASTA
[ ]jp_kx6RDog.hmm2015-04-17 20:31 36KHHMer2 profile of the alignment
[TXT]jp_kx6RDog.html2015-04-17 20:31 136KHTML prediction and alignment data
[ ]jp_kx6RDog.input2015-04-17 17:19 201 Raw input data for analysis
[ ]jp_kx6RDog.jalview2015-04-17 20:31 4.8KJalview annotation file for alignment
[ ]jp_kx6RDog.jnet2015-04-17 20:31 7.1KJnet secondary structure output
[TXT]jp_kx6RDog.profile2015-04-17 20:25 31KPSIBLAST profile from alignment
[ ]jp_kx6RDog.pssm2015-04-17 20:31 42KPSIBLAST PSSM for Jnet
[TXT]jp_kx6RDog.results.html2016-02-15 12:18 83KJPred results page
[TXT]jp_kx6RDog.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_kx6RDog.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_kx6RDog.seq2015-04-17 17:19 209 Sequence data file
[TXT]jp_kx6RDog.simple.html2015-04-17 20:31 1.4KBrief HTML: sequence and prediction only
[TXT]jp_kx6RDog.svg.html2015-04-17 20:32 75KJalview SVG summary of results
[ ]jp_kx6RDog.tar.gz2015-04-17 20:32 1.1MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.