JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:50 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1r0ma1.name2015-04-17 19:10 0 Job name flag file
[ ]jp_SFVtrP7.align2015-04-17 21:49 227KPSIBLAST alignment in FASTA format
[TXT]jp_SFVtrP7.als2015-04-17 21:49 4.1KAlscript command file for PS/PDF output
[ ]jp_SFVtrP7.blast.gz2015-04-17 21:47 13MCompressed PSIBLAST output file
[TXT]jp_SFVtrP7.coils.csv2015-04-17 21:49 1.5KCOILS output in CSV format
[ ]jp_SFVtrP7.coilseq.lupas_142015-04-17 21:49 10KCOILS output, window length 14
[ ]jp_SFVtrP7.coilseq.lupas_212015-04-17 21:49 10KCOILS output, window length 21
[ ]jp_SFVtrP7.coilseq.lupas_282015-04-17 21:49 10KCOILS output, window length 28
[ ]jp_SFVtrP7.concise2015-04-17 21:49 449KPrediction: coiled-coil, solvent, alignment
[ ]jp_SFVtrP7.concise.blc2015-04-17 21:49 227KBLC format prediction and alignment data
[ ]jp_SFVtrP7.concise.fasta2015-04-17 21:49 229KPrediction: coiled-coil, solvent, alignment
[ ]jp_SFVtrP7.concise.pdf2015-04-17 21:49 1.7MPDF prediction and alignment data
[ ]jp_SFVtrP7.concise.ps2015-04-17 21:49 29MPrediction: coiled-coil, solvent, alignment
[ ]jp_SFVtrP7.fasta2015-04-17 21:32 259 Input query sequence in FASTA format
[ ]jp_SFVtrP7.full_MSA.fasta2015-04-17 21:48 23MFull MSA before JPred filters in FASTA
[TXT]jp_SFVtrP7.full_MSA.fasta.noGaps.html2015-04-17 21:50 3.0MFull MSA before JPred filters in FASTA
[TXT]jp_SFVtrP7.full_MSA.fasta.withGaps.html2015-04-17 21:50 68MFull MSA before JPred filters in FASTA
[ ]jp_SFVtrP7.hmm2015-04-17 21:49 46KHHMer2 profile of the alignment
[TXT]jp_SFVtrP7.html2015-04-17 21:49 416KHTML prediction and alignment data
[ ]jp_SFVtrP7.input2015-04-17 19:10 250 Raw input data for analysis
[ ]jp_SFVtrP7.jalview2015-04-17 21:49 5.7KJalview annotation file for alignment
[ ]jp_SFVtrP7.jnet2015-04-17 21:49 8.9KJnet secondary structure output
[TXT]jp_SFVtrP7.profile2015-04-17 21:44 39KPSIBLAST profile from alignment
[ ]jp_SFVtrP7.pssm2015-04-17 21:49 52KPSIBLAST PSSM for Jnet
[TXT]jp_SFVtrP7.results.html2016-02-15 12:18 108KJPred results page
[TXT]jp_SFVtrP7.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_SFVtrP7.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_SFVtrP7.seq2015-04-17 19:10 259 Sequence data file
[TXT]jp_SFVtrP7.simple.html2015-04-17 21:49 1.8KBrief HTML: sequence and prediction only
[TXT]jp_SFVtrP7.svg.html2015-04-17 21:50 100KJalview SVG summary of results
[ ]jp_SFVtrP7.tar.gz2015-04-17 21:50 23MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.