A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:32 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1r71a_.name | 2015-04-17 17:19 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_N7kI4Be.align | 2015-04-17 20:32 | 113K | PSIBLAST alignment in FASTA format |
| jp_N7kI4Be.als | 2015-04-17 20:32 | 2.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_N7kI4Be.blast.gz | 2015-04-17 20:31 | 2.4M | Compressed PSIBLAST output file |
| jp_N7kI4Be.coils.csv | 2015-04-17 20:32 | 714 | COILS output in CSV format |
| jp_N7kI4Be.coilseq.lupas_14 | 2015-04-17 20:32 | 4.8K | COILS output, window length 14 |
| jp_N7kI4Be.coilseq.lupas_21 | 2015-04-17 20:32 | 4.8K | COILS output, window length 21 |
| jp_N7kI4Be.coilseq.lupas_28 | 2015-04-17 20:32 | 4.8K | COILS output, window length 28 |
| jp_N7kI4Be.concise | 2015-04-17 20:32 | 220K | Prediction: coiled-coil, solvent, alignment |
| jp_N7kI4Be.concise.blc | 2015-04-17 20:32 | 113K | BLC format prediction and alignment data |
| jp_N7kI4Be.concise.fasta | 2015-04-17 20:32 | 115K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_N7kI4Be.concise.pdf | 2015-04-17 20:32 | 739K | PDF prediction and alignment data |
| jp_N7kI4Be.concise.ps | 2015-04-17 20:32 | 13M | Prediction: coiled-coil, solvent, alignment |
| jp_N7kI4Be.fasta | 2015-04-17 18:25 | 128 | Input query sequence in FASTA format |
| jp_N7kI4Be.full_MSA.fasta | 2015-04-17 20:31 | 6.2M | Full MSA before JPred filters in FASTA |
| jp_N7kI4Be.full_MSA.fasta.noGaps.html | 2015-04-17 20:32 | 1.3M | Full MSA before JPred filters in FASTA |
| jp_N7kI4Be.full_MSA.fasta.withGaps.html | 2015-04-17 20:32 | 20M | Full MSA before JPred filters in FASTA |
| jp_N7kI4Be.hmm | 2015-04-17 20:32 | 21K | HHMer2 profile of the alignment |
| jp_N7kI4Be.html | 2015-04-17 20:32 | 292K | HTML prediction and alignment data |
| jp_N7kI4Be.input | 2015-04-17 17:19 | 121 | Raw input data for analysis |
| jp_N7kI4Be.jalview | 2015-04-17 20:32 | 3.2K | Jalview annotation file for alignment |
| jp_N7kI4Be.jnet | 2015-04-17 20:32 | 4.2K | Jnet secondary structure output |
| jp_N7kI4Be.profile | 2015-04-17 20:22 | 19K | PSIBLAST profile from alignment |
| jp_N7kI4Be.pssm | 2015-04-17 20:32 | 24K | PSIBLAST PSSM for Jnet |
| jp_N7kI4Be.results.html | 2016-02-15 12:18 | 57K | JPred results page |
| jp_N7kI4Be.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_N7kI4Be.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_N7kI4Be.seq | 2015-04-17 17:19 | 128 | Sequence data file |
| jp_N7kI4Be.simple.html | 2015-04-17 20:32 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_N7kI4Be.svg.html) | jp_N7kI4Be.svg.html | 2015-04-17 20:32 | 49K | Jalview SVG summary of results |
| jp_N7kI4Be.tar.gz | 2015-04-17 20:32 | 5.2M | Archive containing complete results |
