JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:50 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1rtqa_.name2015-04-17 16:42 0 Job name flag file
[ ]jp_P6C5lOw.align2015-04-17 17:48 265KPSIBLAST alignment in FASTA format
[TXT]jp_P6C5lOw.als2015-04-17 17:48 3.7KAlscript command file for PS/PDF output
[ ]jp_P6C5lOw.blast.gz2015-04-17 17:44 22MCompressed PSIBLAST output file
[TXT]jp_P6C5lOw.coils.csv2015-04-17 17:48 1.7KCOILS output in CSV format
[ ]jp_P6C5lOw.coilseq.lupas_142015-04-17 17:48 12KCOILS output, window length 14
[ ]jp_P6C5lOw.coilseq.lupas_212015-04-17 17:48 12KCOILS output, window length 21
[ ]jp_P6C5lOw.coilseq.lupas_282015-04-17 17:48 12KCOILS output, window length 28
[ ]jp_P6C5lOw.concise2015-04-17 17:48 526KPrediction: coiled-coil, solvent, alignment
[ ]jp_P6C5lOw.concise.blc2015-04-17 17:48 265KBLC format prediction and alignment data
[ ]jp_P6C5lOw.concise.fasta2015-04-17 17:48 268KPrediction: coiled-coil, solvent, alignment
[ ]jp_P6C5lOw.concise.pdf2015-04-17 17:48 1.8MPDF prediction and alignment data
[ ]jp_P6C5lOw.concise.ps2015-04-17 17:48 32MPrediction: coiled-coil, solvent, alignment
[ ]jp_P6C5lOw.fasta2015-04-17 17:27 308 Input query sequence in FASTA format
[ ]jp_P6C5lOw.full_MSA.fasta2015-04-17 17:46 44MFull MSA before JPred filters in FASTA
[TXT]jp_P6C5lOw.full_MSA.fasta.noGaps.html2015-04-17 17:49 3.3MFull MSA before JPred filters in FASTA
[TXT]jp_P6C5lOw.full_MSA.fasta.withGaps.html2015-04-17 17:49 100MFull MSA before JPred filters in FASTA
[ ]jp_P6C5lOw.hmm2015-04-17 17:48 55KHHMer2 profile of the alignment
[TXT]jp_P6C5lOw.html2015-04-17 17:48 455KHTML prediction and alignment data
[ ]jp_P6C5lOw.input2015-04-17 16:42 298 Raw input data for analysis
[ ]jp_P6C5lOw.jalview2015-04-17 17:48 6.6KJalview annotation file for alignment
[ ]jp_P6C5lOw.jnet2015-04-17 17:48 11KJnet secondary structure output
[TXT]jp_P6C5lOw.profile2015-04-17 17:42 47KPSIBLAST profile from alignment
[ ]jp_P6C5lOw.pssm2015-04-17 17:48 63KPSIBLAST PSSM for Jnet
[TXT]jp_P6C5lOw.results.html2016-02-15 12:18 123KJPred results page
[TXT]jp_P6C5lOw.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_P6C5lOw.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_P6C5lOw.seq2015-04-17 16:42 308 Sequence data file
[TXT]jp_P6C5lOw.simple.html2015-04-17 17:48 1.8KBrief HTML: sequence and prediction only
[TXT]jp_P6C5lOw.svg.html2015-04-17 17:50 115KJalview SVG summary of results
[ ]jp_P6C5lOw.tar.gz2015-04-17 17:50 33MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.