JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]d1s1da_.name2015-04-17 17:56 0 Job name flag file
[ ]jp_iNA6B3w.input2015-04-17 17:56 324 Raw input data for analysis
[ ]jp_iNA6B3w.fasta2015-04-17 19:28 334 Input query sequence in FASTA format
[ ]jp_iNA6B3w.seq2015-04-17 17:56 334 Sequence data file
[TXT]jp_iNA6B3w.coils.csv2015-04-17 20:11 1.9KCOILS output in CSV format
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]jp_iNA6B3w.simple.html2015-04-17 20:11 2.2KBrief HTML: sequence and prediction only
[TXT]LOG2015-04-17 20:11 4.7KJPred server log file
[TXT]jp_iNA6B3w.als2015-04-17 20:11 5.4KAlscript command file for PS/PDF output
[ ]jp_iNA6B3w.jalview2015-04-17 20:11 7.1KJalview annotation file for alignment
[ ]jp_iNA6B3w.jnet2015-04-17 20:11 12KJnet secondary structure output
[TXT]jp_iNA6B3w.results_jalview.html2016-02-24 17:17 13KJalview results options
[ ]jp_iNA6B3w.coilseq.lupas_142015-04-17 20:11 13KCOILS output, window length 14
[ ]jp_iNA6B3w.coilseq.lupas_212015-04-17 20:11 13KCOILS output, window length 21
[ ]jp_iNA6B3w.coilseq.lupas_282015-04-17 20:11 13KCOILS output, window length 28
[TXT]jp_iNA6B3w.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_iNA6B3w.profile2015-04-17 20:03 51KPSIBLAST profile from alignment
[ ]jp_iNA6B3w.align2015-04-17 20:11 56KPSIBLAST alignment in FASTA format
[ ]jp_iNA6B3w.hmm2015-04-17 20:11 59KHHMer2 profile of the alignment
[ ]jp_iNA6B3w.concise.fasta2015-04-17 20:11 60KPrediction: coiled-coil, solvent, alignment
[ ]jp_iNA6B3w.concise.blc2015-04-17 20:11 60KBLC format prediction and alignment data
[ ]jp_iNA6B3w.pssm2015-04-17 20:11 68KPSIBLAST PSSM for Jnet
[TXT]jp_iNA6B3w.html2015-04-17 20:11 118KHTML prediction and alignment data
[ ]jp_iNA6B3w.concise2015-04-17 20:11 123KPrediction: coiled-coil, solvent, alignment
[TXT]jp_iNA6B3w.svg.html2015-04-17 20:11 127KJalview SVG summary of results
[TXT]jp_iNA6B3w.results.html2016-02-15 12:18 135KJPred results page
[TXT]jp_iNA6B3w.full_MSA.fasta.noGaps.html2015-04-17 20:11 137KFull MSA before JPred filters in FASTA
[ ]jp_iNA6B3w.blast.gz2015-04-17 20:11 241KCompressed PSIBLAST output file
[ ]jp_iNA6B3w.full_MSA.fasta2015-04-17 20:11 366KFull MSA before JPred filters in FASTA
[ ]jp_iNA6B3w.concise.pdf2015-04-17 20:11 392KPDF prediction and alignment data
[ ]jp_iNA6B3w.tar.gz2015-04-17 20:11 905KArchive containing complete results
[TXT]jp_iNA6B3w.full_MSA.fasta.withGaps.html2015-04-17 20:11 1.3MFull MSA before JPred filters in FASTA
[ ]jp_iNA6B3w.concise.ps2015-04-17 20:11 7.4MPrediction: coiled-coil, solvent, alignment
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.