JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:41 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1s7ma_.name2015-04-17 19:11 0 Job name flag file
[ ]jp_KWSyDHj.align2015-04-17 21:41 34KPSIBLAST alignment in FASTA format
[TXT]jp_KWSyDHj.als2015-04-17 21:41 2.5KAlscript command file for PS/PDF output
[ ]jp_KWSyDHj.blast.gz2015-04-17 21:41 82KCompressed PSIBLAST output file
[TXT]jp_KWSyDHj.coils.csv2015-04-17 21:41 1.0KCOILS output in CSV format
[ ]jp_KWSyDHj.coilseq.lupas_142015-04-17 21:41 6.6KCOILS output, window length 14
[ ]jp_KWSyDHj.coilseq.lupas_212015-04-17 21:41 6.6KCOILS output, window length 21
[ ]jp_KWSyDHj.coilseq.lupas_282015-04-17 21:41 6.6KCOILS output, window length 28
[ ]jp_KWSyDHj.concise2015-04-17 21:41 72KPrediction: coiled-coil, solvent, alignment
[ ]jp_KWSyDHj.concise.blc2015-04-17 21:41 36KBLC format prediction and alignment data
[ ]jp_KWSyDHj.concise.fasta2015-04-17 21:41 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_KWSyDHj.concise.pdf2015-04-17 21:41 193KPDF prediction and alignment data
[ ]jp_KWSyDHj.concise.ps2015-04-17 21:41 4.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_KWSyDHj.fasta2015-04-17 21:34 173 Input query sequence in FASTA format
[ ]jp_KWSyDHj.full_MSA.fasta2015-04-17 21:41 115KFull MSA before JPred filters in FASTA
[TXT]jp_KWSyDHj.full_MSA.fasta.noGaps.html2015-04-17 21:41 65KFull MSA before JPred filters in FASTA
[TXT]jp_KWSyDHj.full_MSA.fasta.withGaps.html2015-04-17 21:41 538KFull MSA before JPred filters in FASTA
[ ]jp_KWSyDHj.hmm2015-04-17 21:41 30KHHMer2 profile of the alignment
[TXT]jp_KWSyDHj.html2015-04-17 21:41 83KHTML prediction and alignment data
[ ]jp_KWSyDHj.input2015-04-17 19:11 165 Raw input data for analysis
[ ]jp_KWSyDHj.jalview2015-04-17 21:41 3.9KJalview annotation file for alignment
[ ]jp_KWSyDHj.jnet2015-04-17 21:41 5.8KJnet secondary structure output
[TXT]jp_KWSyDHj.profile2015-04-17 21:38 26KPSIBLAST profile from alignment
[ ]jp_KWSyDHj.pssm2015-04-17 21:41 34KPSIBLAST PSSM for Jnet
[TXT]jp_KWSyDHj.results.html2016-02-15 12:18 70KJPred results page
[TXT]jp_KWSyDHj.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_KWSyDHj.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_KWSyDHj.seq2015-04-17 19:11 173 Sequence data file
[TXT]jp_KWSyDHj.simple.html2015-04-17 21:41 1.4KBrief HTML: sequence and prediction only
[TXT]jp_KWSyDHj.svg.html2015-04-17 21:41 62KJalview SVG summary of results
[ ]jp_KWSyDHj.tar.gz2015-04-17 21:41 360KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.