JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:30 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1s99a_.name2015-04-17 18:31 0 Job name flag file
[ ]jp_0Xm0lqf.align2015-04-17 20:30 14KPSIBLAST alignment in FASTA format
[TXT]jp_0Xm0lqf.als2015-04-17 20:30 2.8KAlscript command file for PS/PDF output
[ ]jp_0Xm0lqf.blast.gz2015-04-17 20:30 58KCompressed PSIBLAST output file
[TXT]jp_0Xm0lqf.coils.csv2015-04-17 20:30 1.1KCOILS output in CSV format
[ ]jp_0Xm0lqf.coilseq.lupas_142015-04-17 20:30 7.8KCOILS output, window length 14
[ ]jp_0Xm0lqf.coilseq.lupas_212015-04-17 20:30 7.8KCOILS output, window length 21
[ ]jp_0Xm0lqf.coilseq.lupas_282015-04-17 20:30 7.8KCOILS output, window length 28
[ ]jp_0Xm0lqf.concise2015-04-17 20:30 36KPrediction: coiled-coil, solvent, alignment
[ ]jp_0Xm0lqf.concise.blc2015-04-17 20:30 17KBLC format prediction and alignment data
[ ]jp_0Xm0lqf.concise.fasta2015-04-17 20:30 16KPrediction: coiled-coil, solvent, alignment
[ ]jp_0Xm0lqf.concise.pdf2015-04-17 20:30 117KPDF prediction and alignment data
[ ]jp_0Xm0lqf.concise.ps2015-04-17 20:30 2.0MPrediction: coiled-coil, solvent, alignment
[ ]jp_0Xm0lqf.fasta2015-04-17 20:26 201 Input query sequence in FASTA format
[ ]jp_0Xm0lqf.full_MSA.fasta2015-04-17 20:30 81KFull MSA before JPred filters in FASTA
[TXT]jp_0Xm0lqf.full_MSA.fasta.noGaps.html2015-04-17 20:30 52KFull MSA before JPred filters in FASTA
[TXT]jp_0Xm0lqf.full_MSA.fasta.withGaps.html2015-04-17 20:30 358KFull MSA before JPred filters in FASTA
[ ]jp_0Xm0lqf.hmm2015-04-17 20:30 35KHHMer2 profile of the alignment
[TXT]jp_0Xm0lqf.html2015-04-17 20:30 48KHTML prediction and alignment data
[ ]jp_0Xm0lqf.input2015-04-17 18:31 193 Raw input data for analysis
[ ]jp_0Xm0lqf.jalview2015-04-17 20:30 4.6KJalview annotation file for alignment
[ ]jp_0Xm0lqf.jnet2015-04-17 20:30 6.8KJnet secondary structure output
[TXT]jp_0Xm0lqf.profile2015-04-17 20:29 30KPSIBLAST profile from alignment
[ ]jp_0Xm0lqf.pssm2015-04-17 20:30 40KPSIBLAST PSSM for Jnet
[TXT]jp_0Xm0lqf.results.html2016-02-15 12:18 82KJPred results page
[TXT]jp_0Xm0lqf.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_0Xm0lqf.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_0Xm0lqf.seq2015-04-17 18:31 201 Sequence data file
[TXT]jp_0Xm0lqf.simple.html2015-04-17 20:30 1.5KBrief HTML: sequence and prediction only
[TXT]jp_0Xm0lqf.svg.html2015-04-17 20:30 74KJalview SVG summary of results
[ ]jp_0Xm0lqf.tar.gz2015-04-17 20:30 283KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.