JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:20 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1sbxa_.name2015-04-17 17:20 0 Job name flag file
[ ]jp_qnMzA8g.align2015-04-17 19:20 12KPSIBLAST alignment in FASTA format
[TXT]jp_qnMzA8g.als2015-04-17 19:20 2.2KAlscript command file for PS/PDF output
[ ]jp_qnMzA8g.blast.gz2015-04-17 19:20 126KCompressed PSIBLAST output file
[TXT]jp_qnMzA8g.coils.csv2015-04-17 19:20 666 COILS output in CSV format
[ ]jp_qnMzA8g.coilseq.lupas_142015-04-17 19:20 4.5KCOILS output, window length 14
[ ]jp_qnMzA8g.coilseq.lupas_212015-04-17 19:20 4.5KCOILS output, window length 21
[ ]jp_qnMzA8g.coilseq.lupas_282015-04-17 19:20 4.5KCOILS output, window length 28
[ ]jp_qnMzA8g.concise2015-04-17 19:20 27KPrediction: coiled-coil, solvent, alignment
[ ]jp_qnMzA8g.concise.blc2015-04-17 19:20 13KBLC format prediction and alignment data
[ ]jp_qnMzA8g.concise.fasta2015-04-17 19:20 13KPrediction: coiled-coil, solvent, alignment
[ ]jp_qnMzA8g.concise.pdf2015-04-17 19:20 89KPDF prediction and alignment data
[ ]jp_qnMzA8g.concise.ps2015-04-17 19:20 1.5MPrediction: coiled-coil, solvent, alignment
[ ]jp_qnMzA8g.fasta2015-04-17 18:26 120 Input query sequence in FASTA format
[ ]jp_qnMzA8g.full_MSA.fasta2015-04-17 19:20 181KFull MSA before JPred filters in FASTA
[TXT]jp_qnMzA8g.full_MSA.fasta.noGaps.html2015-04-17 19:20 193KFull MSA before JPred filters in FASTA
[TXT]jp_qnMzA8g.full_MSA.fasta.withGaps.html2015-04-17 19:20 928KFull MSA before JPred filters in FASTA
[ ]jp_qnMzA8g.hmm2015-04-17 19:20 20KHHMer2 profile of the alignment
[TXT]jp_qnMzA8g.html2015-04-17 19:20 42KHTML prediction and alignment data
[ ]jp_qnMzA8g.input2015-04-17 17:20 113 Raw input data for analysis
[ ]jp_qnMzA8g.jalview2015-04-17 19:20 2.9KJalview annotation file for alignment
[ ]jp_qnMzA8g.jnet2015-04-17 19:20 3.9KJnet secondary structure output
[TXT]jp_qnMzA8g.profile2015-04-17 19:16 17KPSIBLAST profile from alignment
[ ]jp_qnMzA8g.pssm2015-04-17 19:20 23KPSIBLAST PSSM for Jnet
[TXT]jp_qnMzA8g.results.html2016-02-15 12:18 52KJPred results page
[TXT]jp_qnMzA8g.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_qnMzA8g.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_qnMzA8g.seq2015-04-17 17:20 120 Sequence data file
[TXT]jp_qnMzA8g.simple.html2015-04-17 19:20 1.2KBrief HTML: sequence and prediction only
[TXT]jp_qnMzA8g.svg.html2015-04-17 19:20 44KJalview SVG summary of results
[ ]jp_qnMzA8g.tar.gz2015-04-17 19:20 317KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.