A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:02 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1sg4a1.name | 2015-04-17 17:20 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_8oxegOY.align | 2015-04-17 20:01 | 232K | PSIBLAST alignment in FASTA format |
| jp_8oxegOY.als | 2015-04-17 20:01 | 4.2K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_8oxegOY.blast.gz | 2015-04-17 19:57 | 15M | Compressed PSIBLAST output file |
| jp_8oxegOY.coils.csv | 2015-04-17 20:01 | 1.5K | COILS output in CSV format |
| jp_8oxegOY.coilseq.lupas_14 | 2015-04-17 20:01 | 10K | COILS output, window length 14 |
| jp_8oxegOY.coilseq.lupas_21 | 2015-04-17 20:01 | 10K | COILS output, window length 21 |
| jp_8oxegOY.coilseq.lupas_28 | 2015-04-17 20:01 | 10K | COILS output, window length 28 |
| jp_8oxegOY.concise | 2015-04-17 20:01 | 458K | Prediction: coiled-coil, solvent, alignment |
| jp_8oxegOY.concise.blc | 2015-04-17 20:01 | 232K | BLC format prediction and alignment data |
| jp_8oxegOY.concise.fasta | 2015-04-17 20:01 | 234K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_8oxegOY.concise.pdf | 2015-04-17 20:01 | 1.6M | PDF prediction and alignment data |
| jp_8oxegOY.concise.ps | 2015-04-17 20:01 | 29M | Prediction: coiled-coil, solvent, alignment |
| jp_8oxegOY.fasta | 2015-04-17 18:26 | 265 | Input query sequence in FASTA format |
| jp_8oxegOY.full_MSA.fasta | 2015-04-17 20:00 | 26M | Full MSA before JPred filters in FASTA |
| jp_8oxegOY.full_MSA.fasta.noGaps.html | 2015-04-17 20:02 | 3.7M | Full MSA before JPred filters in FASTA |
| jp_8oxegOY.full_MSA.fasta.withGaps.html | 2015-04-17 20:02 | 75M | Full MSA before JPred filters in FASTA |
| jp_8oxegOY.hmm | 2015-04-17 20:01 | 47K | HHMer2 profile of the alignment |
| jp_8oxegOY.html | 2015-04-17 20:01 | 427K | HTML prediction and alignment data |
| jp_8oxegOY.input | 2015-04-17 17:20 | 256 | Raw input data for analysis |
| jp_8oxegOY.jalview | 2015-04-17 20:01 | 5.9K | Jalview annotation file for alignment |
| jp_8oxegOY.jnet | 2015-04-17 20:01 | 9.1K | Jnet secondary structure output |
| jp_8oxegOY.profile | 2015-04-17 19:40 | 40K | PSIBLAST profile from alignment |
| jp_8oxegOY.pssm | 2015-04-17 20:01 | 53K | PSIBLAST PSSM for Jnet |
| jp_8oxegOY.results.html | 2016-02-15 12:18 | 111K | JPred results page |
| jp_8oxegOY.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_8oxegOY.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_8oxegOY.seq | 2015-04-17 17:20 | 265 | Sequence data file |
| jp_8oxegOY.simple.html | 2015-04-17 20:01 | 1.9K | Brief HTML: sequence and prediction only |
![[TXT]](jp_8oxegOY.svg.html) | jp_8oxegOY.svg.html | 2015-04-17 20:02 | 103K | Jalview SVG summary of results |
| jp_8oxegOY.tar.gz | 2015-04-17 20:03 | 26M | Archive containing complete results |
