JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:35 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1sj7a1.name2015-04-17 16:07 0 Job name flag file
[ ]jp_YYBtjkc.align2015-04-17 16:34 13KPSIBLAST alignment in FASTA format
[TXT]jp_YYBtjkc.als2015-04-17 16:34 2.1KAlscript command file for PS/PDF output
[ ]jp_YYBtjkc.blast.gz2015-04-17 16:34 68KCompressed PSIBLAST output file
[TXT]jp_YYBtjkc.coils.csv2015-04-17 16:34 1.0KCOILS output in CSV format
[ ]jp_YYBtjkc.coilseq.lupas_142015-04-17 16:34 7.0KCOILS output, window length 14
[ ]jp_YYBtjkc.coilseq.lupas_212015-04-17 16:34 7.0KCOILS output, window length 21
[ ]jp_YYBtjkc.coilseq.lupas_282015-04-17 16:34 7.0KCOILS output, window length 28
[ ]jp_YYBtjkc.concise2015-04-17 16:34 32KPrediction: coiled-coil, solvent, alignment
[ ]jp_YYBtjkc.concise.blc2015-04-17 16:34 15KBLC format prediction and alignment data
[ ]jp_YYBtjkc.concise.fasta2015-04-17 16:34 15KPrediction: coiled-coil, solvent, alignment
[ ]jp_YYBtjkc.concise.pdf2015-04-17 16:34 97KPDF prediction and alignment data
[ ]jp_YYBtjkc.concise.ps2015-04-17 16:34 1.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_YYBtjkc.fasta2015-04-17 16:31 182 Input query sequence in FASTA format
[ ]jp_YYBtjkc.full_MSA.fasta2015-04-17 16:34 104KFull MSA before JPred filters in FASTA
[TXT]jp_YYBtjkc.full_MSA.fasta.noGaps.html2015-04-17 16:34 56KFull MSA before JPred filters in FASTA
[TXT]jp_YYBtjkc.full_MSA.fasta.withGaps.html2015-04-17 16:34 304KFull MSA before JPred filters in FASTA
[ ]jp_YYBtjkc.hmm2015-04-17 16:34 31KHHMer2 profile of the alignment
[TXT]jp_YYBtjkc.html2015-04-17 16:34 45KHTML prediction and alignment data
[ ]jp_YYBtjkc.input2015-04-17 16:07 174 Raw input data for analysis
[ ]jp_YYBtjkc.jalview2015-04-17 16:34 4.3KJalview annotation file for alignment
[ ]jp_YYBtjkc.jnet2015-04-17 16:34 6.1KJnet secondary structure output
[TXT]jp_YYBtjkc.profile2015-04-17 16:34 27KPSIBLAST profile from alignment
[ ]jp_YYBtjkc.pssm2015-04-17 16:34 36KPSIBLAST PSSM for Jnet
[TXT]jp_YYBtjkc.results.html2016-02-15 12:18 74KJPred results page
[TXT]jp_YYBtjkc.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_YYBtjkc.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_YYBtjkc.seq2015-04-17 16:07 182 Sequence data file
[TXT]jp_YYBtjkc.simple.html2015-04-17 16:34 1.3KBrief HTML: sequence and prediction only
[TXT]jp_YYBtjkc.svg.html2015-04-17 16:35 66KJalview SVG summary of results
[ ]jp_YYBtjkc.tar.gz2015-04-17 16:35 248KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.