JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 17:31 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1slua_.name2015-04-17 16:43 0 Job name flag file
[ ]jp_jHkyBGb.align2015-04-17 17:30 23KPSIBLAST alignment in FASTA format
[TXT]jp_jHkyBGb.als2015-04-17 17:30 3.0KAlscript command file for PS/PDF output
[ ]jp_jHkyBGb.blast.gz2015-04-17 17:30 91KCompressed PSIBLAST output file
[TXT]jp_jHkyBGb.coils.csv2015-04-17 17:30 816 COILS output in CSV format
[ ]jp_jHkyBGb.coilseq.lupas_142015-04-17 17:30 5.5KCOILS output, window length 14
[ ]jp_jHkyBGb.coilseq.lupas_212015-04-17 17:30 5.5KCOILS output, window length 21
[ ]jp_jHkyBGb.coilseq.lupas_282015-04-17 17:30 5.5KCOILS output, window length 28
[ ]jp_jHkyBGb.concise2015-04-17 17:30 50KPrediction: coiled-coil, solvent, alignment
[ ]jp_jHkyBGb.concise.blc2015-04-17 17:30 25KBLC format prediction and alignment data
[ ]jp_jHkyBGb.concise.fasta2015-04-17 17:30 24KPrediction: coiled-coil, solvent, alignment
[ ]jp_jHkyBGb.concise.pdf2015-04-17 17:31 162KPDF prediction and alignment data
[ ]jp_jHkyBGb.concise.ps2015-04-17 17:30 2.9MPrediction: coiled-coil, solvent, alignment
[ ]jp_jHkyBGb.fasta2015-04-17 17:28 145 Input query sequence in FASTA format
[ ]jp_jHkyBGb.full_MSA.fasta2015-04-17 17:30 90KFull MSA before JPred filters in FASTA
[TXT]jp_jHkyBGb.full_MSA.fasta.noGaps.html2015-04-17 17:31 70KFull MSA before JPred filters in FASTA
[TXT]jp_jHkyBGb.full_MSA.fasta.withGaps.html2015-04-17 17:31 538KFull MSA before JPred filters in FASTA
[ ]jp_jHkyBGb.hmm2015-04-17 17:30 25KHHMer2 profile of the alignment
[TXT]jp_jHkyBGb.html2015-04-17 17:30 64KHTML prediction and alignment data
[ ]jp_jHkyBGb.input2015-04-17 16:43 138 Raw input data for analysis
[ ]jp_jHkyBGb.jalview2015-04-17 17:30 3.4KJalview annotation file for alignment
[ ]jp_jHkyBGb.jnet2015-04-17 17:30 4.8KJnet secondary structure output
[TXT]jp_jHkyBGb.profile2015-04-17 17:30 21KPSIBLAST profile from alignment
[ ]jp_jHkyBGb.pssm2015-04-17 17:30 28KPSIBLAST PSSM for Jnet
[TXT]jp_jHkyBGb.results.html2016-02-15 12:18 63KJPred results page
[TXT]jp_jHkyBGb.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_jHkyBGb.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_jHkyBGb.seq2015-04-17 16:43 145 Sequence data file
[TXT]jp_jHkyBGb.simple.html2015-04-17 17:30 1.4KBrief HTML: sequence and prediction only
[TXT]jp_jHkyBGb.svg.html2015-04-17 17:31 55KJalview SVG summary of results
[ ]jp_jHkyBGb.tar.gz2015-04-17 17:31 376KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.