JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:32 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1syxb_.name2015-04-17 18:32 0 Job name flag file
[ ]jp_tM5tHUo.align2015-04-17 20:31 33KPSIBLAST alignment in FASTA format
[TXT]jp_tM5tHUo.als2015-04-17 20:31 1.7KAlscript command file for PS/PDF output
[ ]jp_tM5tHUo.blast.gz2015-04-17 20:31 132KCompressed PSIBLAST output file
[TXT]jp_tM5tHUo.coils.csv2015-04-17 20:31 402 COILS output in CSV format
[ ]jp_tM5tHUo.coilseq.lupas_142015-04-17 20:31 2.6KCOILS output, window length 14
[ ]jp_tM5tHUo.coilseq.lupas_212015-04-17 20:31 2.6KCOILS output, window length 21
[ ]jp_tM5tHUo.coilseq.lupas_282015-04-17 20:31 2.6KCOILS output, window length 28
[ ]jp_tM5tHUo.concise2015-04-17 20:31 64KPrediction: coiled-coil, solvent, alignment
[ ]jp_tM5tHUo.concise.blc2015-04-17 20:31 34KBLC format prediction and alignment data
[ ]jp_tM5tHUo.concise.fasta2015-04-17 20:31 34KPrediction: coiled-coil, solvent, alignment
[ ]jp_tM5tHUo.concise.pdf2015-04-17 20:31 166KPDF prediction and alignment data
[ ]jp_tM5tHUo.concise.ps2015-04-17 20:31 3.3MPrediction: coiled-coil, solvent, alignment
[ ]jp_tM5tHUo.fasta2015-04-17 20:27 75 Input query sequence in FASTA format
[ ]jp_tM5tHUo.full_MSA.fasta2015-04-17 20:31 249KFull MSA before JPred filters in FASTA
[TXT]jp_tM5tHUo.full_MSA.fasta.noGaps.html2015-04-17 20:31 186KFull MSA before JPred filters in FASTA
[TXT]jp_tM5tHUo.full_MSA.fasta.withGaps.html2015-04-17 20:31 1.1MFull MSA before JPred filters in FASTA
[ ]jp_tM5tHUo.hmm2015-04-17 20:31 12KHHMer2 profile of the alignment
[TXT]jp_tM5tHUo.html2015-04-17 20:31 120KHTML prediction and alignment data
[ ]jp_tM5tHUo.input2015-04-17 18:32 69 Raw input data for analysis
[ ]jp_tM5tHUo.jalview2015-04-17 20:31 2.0KJalview annotation file for alignment
[ ]jp_tM5tHUo.jnet2015-04-17 20:31 2.4KJnet secondary structure output
[TXT]jp_tM5tHUo.profile2015-04-17 20:31 10KPSIBLAST profile from alignment
[ ]jp_tM5tHUo.pssm2015-04-17 20:31 13KPSIBLAST PSSM for Jnet
[TXT]jp_tM5tHUo.results.html2016-02-15 12:18 35KJPred results page
[TXT]jp_tM5tHUo.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_tM5tHUo.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_tM5tHUo.seq2015-04-17 18:32 75 Sequence data file
[TXT]jp_tM5tHUo.simple.html2015-04-17 20:31 1.1KBrief HTML: sequence and prediction only
[TXT]jp_tM5tHUo.svg.html2015-04-17 20:31 27KJalview SVG summary of results
[ ]jp_tM5tHUo.tar.gz2015-04-17 20:32 445KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.