JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:20 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1sz7a_.name2015-04-17 17:20 0 Job name flag file
[ ]jp_nLNgUXA.align2015-04-17 19:20 84KPSIBLAST alignment in FASTA format
[TXT]jp_nLNgUXA.als2015-04-17 19:20 2.7KAlscript command file for PS/PDF output
[ ]jp_nLNgUXA.blast.gz2015-04-17 19:19 460KCompressed PSIBLAST output file
[TXT]jp_nLNgUXA.coils.csv2015-04-17 19:20 1.0KCOILS output in CSV format
[ ]jp_nLNgUXA.coilseq.lupas_142015-04-17 19:20 6.7KCOILS output, window length 14
[ ]jp_nLNgUXA.coilseq.lupas_212015-04-17 19:20 6.7KCOILS output, window length 21
[ ]jp_nLNgUXA.coilseq.lupas_282015-04-17 19:20 6.7KCOILS output, window length 28
[ ]jp_nLNgUXA.concise2015-04-17 19:20 169KPrediction: coiled-coil, solvent, alignment
[ ]jp_nLNgUXA.concise.blc2015-04-17 19:20 85KBLC format prediction and alignment data
[ ]jp_nLNgUXA.concise.fasta2015-04-17 19:20 86KPrediction: coiled-coil, solvent, alignment
[ ]jp_nLNgUXA.concise.pdf2015-04-17 19:20 560KPDF prediction and alignment data
[ ]jp_nLNgUXA.concise.ps2015-04-17 19:20 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_nLNgUXA.fasta2015-04-17 18:26 174 Input query sequence in FASTA format
[ ]jp_nLNgUXA.full_MSA.fasta2015-04-17 19:20 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_nLNgUXA.full_MSA.fasta.noGaps.html2015-04-17 19:20 246KFull MSA before JPred filters in FASTA
[TXT]jp_nLNgUXA.full_MSA.fasta.withGaps.html2015-04-17 19:20 3.5MFull MSA before JPred filters in FASTA
[ ]jp_nLNgUXA.hmm2015-04-17 19:20 30KHHMer2 profile of the alignment
[TXT]jp_nLNgUXA.html2015-04-17 19:20 195KHTML prediction and alignment data
[ ]jp_nLNgUXA.input2015-04-17 17:20 166 Raw input data for analysis
[ ]jp_nLNgUXA.jalview2015-04-17 19:20 4.1KJalview annotation file for alignment
[ ]jp_nLNgUXA.jnet2015-04-17 19:20 5.9KJnet secondary structure output
[TXT]jp_nLNgUXA.profile2015-04-17 19:08 26KPSIBLAST profile from alignment
[ ]jp_nLNgUXA.pssm2015-04-17 19:20 34KPSIBLAST PSSM for Jnet
[TXT]jp_nLNgUXA.results.html2016-02-15 12:18 73KJPred results page
[TXT]jp_nLNgUXA.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_nLNgUXA.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_nLNgUXA.seq2015-04-17 17:20 174 Sequence data file
[TXT]jp_nLNgUXA.simple.html2015-04-17 19:20 1.4KBrief HTML: sequence and prediction only
[TXT]jp_nLNgUXA.svg.html2015-04-17 19:20 65KJalview SVG summary of results
[ ]jp_nLNgUXA.tar.gz2015-04-17 19:20 1.4MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.