A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:33 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1t77a1.name | 2015-04-17 18:32 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_vF4kz0S.align | 2015-04-17 20:32 | 136K | PSIBLAST alignment in FASTA format |
| jp_vF4kz0S.als | 2015-04-17 20:32 | 3.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_vF4kz0S.blast.gz | 2015-04-17 20:31 | 3.5M | Compressed PSIBLAST output file |
| jp_vF4kz0S.coils.csv | 2015-04-17 20:32 | 1.8K | COILS output in CSV format |
| jp_vF4kz0S.coilseq.lupas_14 | 2015-04-17 20:32 | 13K | COILS output, window length 14 |
| jp_vF4kz0S.coilseq.lupas_21 | 2015-04-17 20:32 | 13K | COILS output, window length 21 |
| jp_vF4kz0S.coilseq.lupas_28 | 2015-04-17 20:32 | 13K | COILS output, window length 28 |
| jp_vF4kz0S.concise | 2015-04-17 20:32 | 277K | Prediction: coiled-coil, solvent, alignment |
| jp_vF4kz0S.concise.blc | 2015-04-17 20:32 | 139K | BLC format prediction and alignment data |
| jp_vF4kz0S.concise.fasta | 2015-04-17 20:32 | 139K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_vF4kz0S.concise.pdf | 2015-04-17 20:32 | 936K | PDF prediction and alignment data |
| jp_vF4kz0S.concise.ps | 2015-04-17 20:32 | 17M | Prediction: coiled-coil, solvent, alignment |
| jp_vF4kz0S.fasta | 2015-04-17 20:28 | 321 | Input query sequence in FASTA format |
| jp_vF4kz0S.full_MSA.fasta | 2015-04-17 20:32 | 5.2M | Full MSA before JPred filters in FASTA |
| jp_vF4kz0S.full_MSA.fasta.noGaps.html | 2015-04-17 20:32 | 919K | Full MSA before JPred filters in FASTA |
| jp_vF4kz0S.full_MSA.fasta.withGaps.html | 2015-04-17 20:32 | 16M | Full MSA before JPred filters in FASTA |
| jp_vF4kz0S.hmm | 2015-04-17 20:32 | 57K | HHMer2 profile of the alignment |
| jp_vF4kz0S.html | 2015-04-17 20:32 | 242K | HTML prediction and alignment data |
| jp_vF4kz0S.input | 2015-04-17 18:32 | 311 | Raw input data for analysis |
| jp_vF4kz0S.jalview | 2015-04-17 20:32 | 6.8K | Jalview annotation file for alignment |
| jp_vF4kz0S.jnet | 2015-04-17 20:32 | 11K | Jnet secondary structure output |
| jp_vF4kz0S.profile | 2015-04-17 20:30 | 49K | PSIBLAST profile from alignment |
| jp_vF4kz0S.pssm | 2015-04-17 20:32 | 65K | PSIBLAST PSSM for Jnet |
| jp_vF4kz0S.results.html | 2016-02-15 12:18 | 129K | JPred results page |
| jp_vF4kz0S.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_vF4kz0S.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_vF4kz0S.seq | 2015-04-17 18:32 | 321 | Sequence data file |
| jp_vF4kz0S.simple.html | 2015-04-17 20:32 | 1.8K | Brief HTML: sequence and prediction only |
![[TXT]](jp_vF4kz0S.svg.html) | jp_vF4kz0S.svg.html | 2015-04-17 20:33 | 120K | Jalview SVG summary of results |
| jp_vF4kz0S.tar.gz | 2015-04-17 20:33 | 5.9M | Archive containing complete results |
