JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:40 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tf5a2.name2015-04-17 19:11 0 Job name flag file
[ ]jp_t3LTrvO.align2015-04-17 21:39 191KPSIBLAST alignment in FASTA format
[TXT]jp_t3LTrvO.als2015-04-17 21:39 2.2KAlscript command file for PS/PDF output
[ ]jp_t3LTrvO.blast.gz2015-04-17 21:38 5.1MCompressed PSIBLAST output file
[TXT]jp_t3LTrvO.coils.csv2015-04-17 21:39 1.3KCOILS output in CSV format
[ ]jp_t3LTrvO.coilseq.lupas_142015-04-17 21:39 8.8KCOILS output, window length 14
[ ]jp_t3LTrvO.coilseq.lupas_212015-04-17 21:39 8.8KCOILS output, window length 21
[ ]jp_t3LTrvO.coilseq.lupas_282015-04-17 21:39 8.8KCOILS output, window length 28
[ ]jp_t3LTrvO.concise2015-04-17 21:39 379KPrediction: coiled-coil, solvent, alignment
[ ]jp_t3LTrvO.concise.blc2015-04-17 21:39 192KBLC format prediction and alignment data
[ ]jp_t3LTrvO.concise.fasta2015-04-17 21:39 194KPrediction: coiled-coil, solvent, alignment
[ ]jp_t3LTrvO.concise.pdf2015-04-17 21:39 1.3MPDF prediction and alignment data
[ ]jp_t3LTrvO.concise.ps2015-04-17 21:39 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_t3LTrvO.fasta2015-04-17 21:35 225 Input query sequence in FASTA format
[ ]jp_t3LTrvO.full_MSA.fasta2015-04-17 21:38 9.1MFull MSA before JPred filters in FASTA
[TXT]jp_t3LTrvO.full_MSA.fasta.noGaps.html2015-04-17 21:40 1.2MFull MSA before JPred filters in FASTA
[TXT]jp_t3LTrvO.full_MSA.fasta.withGaps.html2015-04-17 21:40 19MFull MSA before JPred filters in FASTA
[ ]jp_t3LTrvO.hmm2015-04-17 21:39 39KHHMer2 profile of the alignment
[TXT]jp_t3LTrvO.html2015-04-17 21:39 377KHTML prediction and alignment data
[ ]jp_t3LTrvO.input2015-04-17 19:11 217 Raw input data for analysis
[ ]jp_t3LTrvO.jalview2015-04-17 21:39 5.2KJalview annotation file for alignment
[ ]jp_t3LTrvO.jnet2015-04-17 21:39 7.7KJnet secondary structure output
[TXT]jp_t3LTrvO.profile2015-04-17 21:37 34KPSIBLAST profile from alignment
[ ]jp_t3LTrvO.pssm2015-04-17 21:39 45KPSIBLAST PSSM for Jnet
[TXT]jp_t3LTrvO.results.html2016-02-15 12:18 89KJPred results page
[TXT]jp_t3LTrvO.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_t3LTrvO.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_t3LTrvO.seq2015-04-17 19:11 225 Sequence data file
[TXT]jp_t3LTrvO.simple.html2015-04-17 21:39 1.4KBrief HTML: sequence and prediction only
[TXT]jp_t3LTrvO.svg.html2015-04-17 21:40 81KJalview SVG summary of results
[ ]jp_t3LTrvO.tar.gz2015-04-17 21:40 8.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.