JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:33 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tt8a_.name2015-04-17 17:57 0 Job name flag file
[ ]jp_fywToBC.align2015-04-17 19:32 113KPSIBLAST alignment in FASTA format
[TXT]jp_fywToBC.als2015-04-17 19:32 2.8KAlscript command file for PS/PDF output
[ ]jp_fywToBC.blast.gz2015-04-17 19:32 569KCompressed PSIBLAST output file
[TXT]jp_fywToBC.coils.csv2015-04-17 19:32 1.0KCOILS output in CSV format
[ ]jp_fywToBC.coilseq.lupas_142015-04-17 19:32 6.9KCOILS output, window length 14
[ ]jp_fywToBC.coilseq.lupas_212015-04-17 19:32 6.9KCOILS output, window length 21
[ ]jp_fywToBC.coilseq.lupas_282015-04-17 19:32 6.9KCOILS output, window length 28
[ ]jp_fywToBC.concise2015-04-17 19:32 223KPrediction: coiled-coil, solvent, alignment
[ ]jp_fywToBC.concise.blc2015-04-17 19:32 113KBLC format prediction and alignment data
[ ]jp_fywToBC.concise.fasta2015-04-17 19:32 114KPrediction: coiled-coil, solvent, alignment
[ ]jp_fywToBC.concise.pdf2015-04-17 19:33 791KPDF prediction and alignment data
[ ]jp_fywToBC.concise.ps2015-04-17 19:32 14MPrediction: coiled-coil, solvent, alignment
[ ]jp_fywToBC.fasta2015-04-17 19:30 179 Input query sequence in FASTA format
[ ]jp_fywToBC.full_MSA.fasta2015-04-17 19:32 971KFull MSA before JPred filters in FASTA
[TXT]jp_fywToBC.full_MSA.fasta.noGaps.html2015-04-17 19:33 258KFull MSA before JPred filters in FASTA
[TXT]jp_fywToBC.full_MSA.fasta.withGaps.html2015-04-17 19:33 3.5MFull MSA before JPred filters in FASTA
[ ]jp_fywToBC.hmm2015-04-17 19:32 31KHHMer2 profile of the alignment
[TXT]jp_fywToBC.html2015-04-17 19:32 246KHTML prediction and alignment data
[ ]jp_fywToBC.input2015-04-17 17:57 171 Raw input data for analysis
[ ]jp_fywToBC.jalview2015-04-17 19:32 4.1KJalview annotation file for alignment
[ ]jp_fywToBC.jnet2015-04-17 19:32 6.0KJnet secondary structure output
[TXT]jp_fywToBC.profile2015-04-17 19:31 26KPSIBLAST profile from alignment
[ ]jp_fywToBC.pssm2015-04-17 19:32 35KPSIBLAST PSSM for Jnet
[TXT]jp_fywToBC.results.html2016-02-15 12:18 75KJPred results page
[TXT]jp_fywToBC.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_fywToBC.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_fywToBC.seq2015-04-17 17:57 179 Sequence data file
[TXT]jp_fywToBC.simple.html2015-04-17 19:32 1.5KBrief HTML: sequence and prediction only
[TXT]jp_fywToBC.svg.html2015-04-17 19:33 67KJalview SVG summary of results
[ ]jp_fywToBC.tar.gz2015-04-17 19:33 1.8MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.