JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:32 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tuka_.name2015-04-17 18:33 0 Job name flag file
[ ]jp_Pzg2V0L.align2015-04-17 20:32 16KPSIBLAST alignment in FASTA format
[TXT]jp_Pzg2V0L.als2015-04-17 20:32 1.5KAlscript command file for PS/PDF output
[ ]jp_Pzg2V0L.blast.gz2015-04-17 20:32 50KCompressed PSIBLAST output file
[TXT]jp_Pzg2V0L.coils.csv2015-04-17 20:32 432 COILS output in CSV format
[ ]jp_Pzg2V0L.coilseq.lupas_142015-04-17 20:32 2.8KCOILS output, window length 14
[ ]jp_Pzg2V0L.coilseq.lupas_212015-04-17 20:32 2.8KCOILS output, window length 21
[ ]jp_Pzg2V0L.coilseq.lupas_282015-04-17 20:32 2.8KCOILS output, window length 28
[ ]jp_Pzg2V0L.concise2015-04-17 20:32 33KPrediction: coiled-coil, solvent, alignment
[ ]jp_Pzg2V0L.concise.blc2015-04-17 20:32 17KBLC format prediction and alignment data
[ ]jp_Pzg2V0L.concise.fasta2015-04-17 20:32 17KPrediction: coiled-coil, solvent, alignment
[ ]jp_Pzg2V0L.concise.pdf2015-04-17 20:32 104KPDF prediction and alignment data
[ ]jp_Pzg2V0L.concise.ps2015-04-17 20:32 1.8MPrediction: coiled-coil, solvent, alignment
[ ]jp_Pzg2V0L.fasta2015-04-17 20:28 80 Input query sequence in FASTA format
[ ]jp_Pzg2V0L.full_MSA.fasta2015-04-17 20:32 42KFull MSA before JPred filters in FASTA
[TXT]jp_Pzg2V0L.full_MSA.fasta.noGaps.html2015-04-17 20:32 60KFull MSA before JPred filters in FASTA
[TXT]jp_Pzg2V0L.full_MSA.fasta.withGaps.html2015-04-17 20:32 269KFull MSA before JPred filters in FASTA
[ ]jp_Pzg2V0L.hmm2015-04-17 20:32 13KHHMer2 profile of the alignment
[TXT]jp_Pzg2V0L.html2015-04-17 20:32 61KHTML prediction and alignment data
[ ]jp_Pzg2V0L.input2015-04-17 18:33 74 Raw input data for analysis
[ ]jp_Pzg2V0L.jalview2015-04-17 20:32 2.1KJalview annotation file for alignment
[ ]jp_Pzg2V0L.jnet2015-04-17 20:32 2.5KJnet secondary structure output
[TXT]jp_Pzg2V0L.profile2015-04-17 20:31 11KPSIBLAST profile from alignment
[ ]jp_Pzg2V0L.pssm2015-04-17 20:32 14KPSIBLAST PSSM for Jnet
[TXT]jp_Pzg2V0L.results.html2016-02-15 12:18 36KJPred results page
[TXT]jp_Pzg2V0L.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Pzg2V0L.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Pzg2V0L.seq2015-04-17 18:33 80 Sequence data file
[TXT]jp_Pzg2V0L.simple.html2015-04-17 20:32 1.0KBrief HTML: sequence and prediction only
[TXT]jp_Pzg2V0L.svg.html2015-04-17 20:32 28KJalview SVG summary of results
[ ]jp_Pzg2V0L.tar.gz2015-04-17 20:32 236KArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.