A Protein Secondary Structure Prediction Server
| Name | Last modified | Size | Description | |
|---|---|---|---|---|
![[TXT]](/icons/text.gif){kind=icon} | LOG | 2015-04-17 20:32 | 4.7K | JPred server log file |
| README | 2016-02-15 12:18 | 2.1K | Results file descriptions |
| d1twfc2.name | 2015-04-17 18:33 | 0 | Job name flag file |
![[ ]](/icons/unknown.gif){kind=icon} | jp_nFGY7Yr.align | 2015-04-17 20:31 | 92K | PSIBLAST alignment in FASTA format |
| jp_nFGY7Yr.als | 2015-04-17 20:32 | 2.4K | Alscript command file for PS/PDF output |
![[ ]](/icons/compressed.gif){kind=icon} | jp_nFGY7Yr.blast.gz | 2015-04-17 20:31 | 824K | Compressed PSIBLAST output file |
| jp_nFGY7Yr.coils.csv | 2015-04-17 20:32 | 816 | COILS output in CSV format |
| jp_nFGY7Yr.coilseq.lupas_14 | 2015-04-17 20:32 | 5.5K | COILS output, window length 14 |
| jp_nFGY7Yr.coilseq.lupas_21 | 2015-04-17 20:32 | 5.5K | COILS output, window length 21 |
| jp_nFGY7Yr.coilseq.lupas_28 | 2015-04-17 20:32 | 5.5K | COILS output, window length 28 |
| jp_nFGY7Yr.concise | 2015-04-17 20:32 | 182K | Prediction: coiled-coil, solvent, alignment |
| jp_nFGY7Yr.concise.blc | 2015-04-17 20:32 | 93K | BLC format prediction and alignment data |
| jp_nFGY7Yr.concise.fasta | 2015-04-17 20:32 | 93K | Prediction: coiled-coil, solvent, alignment |
![[ ]](/icons/layout.gif){kind=icon} | jp_nFGY7Yr.concise.pdf | 2015-04-17 20:32 | 640K | PDF prediction and alignment data |
| jp_nFGY7Yr.concise.ps | 2015-04-17 20:32 | 11M | Prediction: coiled-coil, solvent, alignment |
| jp_nFGY7Yr.fasta | 2015-04-17 20:29 | 145 | Input query sequence in FASTA format |
| jp_nFGY7Yr.full_MSA.fasta | 2015-04-17 20:31 | 1.3M | Full MSA before JPred filters in FASTA |
| jp_nFGY7Yr.full_MSA.fasta.noGaps.html | 2015-04-17 20:32 | 268K | Full MSA before JPred filters in FASTA |
| jp_nFGY7Yr.full_MSA.fasta.withGaps.html | 2015-04-17 20:32 | 3.3M | Full MSA before JPred filters in FASTA |
| jp_nFGY7Yr.hmm | 2015-04-17 20:32 | 25K | HHMer2 profile of the alignment |
| jp_nFGY7Yr.html | 2015-04-17 20:32 | 224K | HTML prediction and alignment data |
| jp_nFGY7Yr.input | 2015-04-17 18:33 | 138 | Raw input data for analysis |
| jp_nFGY7Yr.jalview | 2015-04-17 20:32 | 3.4K | Jalview annotation file for alignment |
| jp_nFGY7Yr.jnet | 2015-04-17 20:32 | 4.8K | Jnet secondary structure output |
| jp_nFGY7Yr.profile | 2015-04-17 20:30 | 21K | PSIBLAST profile from alignment |
| jp_nFGY7Yr.pssm | 2015-04-17 20:31 | 28K | PSIBLAST PSSM for Jnet |
| jp_nFGY7Yr.results.html | 2016-02-15 12:18 | 61K | JPred results page |
| jp_nFGY7Yr.results_jalview.html | 2016-02-24 17:17 | 13K | Jalview results options |
| jp_nFGY7Yr.results_jalview_app.html | 2016-02-24 17:17 | 16K | HTML prediction and alignment data |
| jp_nFGY7Yr.seq | 2015-04-17 18:33 | 145 | Sequence data file |
| jp_nFGY7Yr.simple.html | 2015-04-17 20:32 | 1.3K | Brief HTML: sequence and prediction only |
![[TXT]](jp_nFGY7Yr.svg.html) | jp_nFGY7Yr.svg.html | 2015-04-17 20:32 | 52K | Jalview SVG summary of results |
| jp_nFGY7Yr.tar.gz | 2015-04-17 20:32 | 1.9M | Archive containing complete results |
