JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 18:39 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1tzba_.name2015-04-17 17:22 0 Job name flag file
[ ]jp_8sWPCF4.align2015-04-17 18:37 193KPSIBLAST alignment in FASTA format
[TXT]jp_8sWPCF4.als2015-04-17 18:37 4.2KAlscript command file for PS/PDF output
[ ]jp_8sWPCF4.blast.gz2015-04-17 18:35 12MCompressed PSIBLAST output file
[TXT]jp_8sWPCF4.coils.csv2015-04-17 18:37 1.8KCOILS output in CSV format
[ ]jp_8sWPCF4.coilseq.lupas_142015-04-17 18:37 13KCOILS output, window length 14
[ ]jp_8sWPCF4.coilseq.lupas_212015-04-17 18:37 13KCOILS output, window length 21
[ ]jp_8sWPCF4.coilseq.lupas_282015-04-17 18:37 13KCOILS output, window length 28
[ ]jp_8sWPCF4.concise2015-04-17 18:37 387KPrediction: coiled-coil, solvent, alignment
[ ]jp_8sWPCF4.concise.blc2015-04-17 18:37 195KBLC format prediction and alignment data
[ ]jp_8sWPCF4.concise.fasta2015-04-17 18:37 196KPrediction: coiled-coil, solvent, alignment
[ ]jp_8sWPCF4.concise.pdf2015-04-17 18:38 1.3MPDF prediction and alignment data
[ ]jp_8sWPCF4.concise.ps2015-04-17 18:38 24MPrediction: coiled-coil, solvent, alignment
[ ]jp_8sWPCF4.fasta2015-04-17 18:27 318 Input query sequence in FASTA format
[ ]jp_8sWPCF4.full_MSA.fasta2015-04-17 18:37 49MFull MSA before JPred filters in FASTA
[TXT]jp_8sWPCF4.full_MSA.fasta.noGaps.html2015-04-17 18:39 4.2MFull MSA before JPred filters in FASTA
[TXT]jp_8sWPCF4.full_MSA.fasta.withGaps.html2015-04-17 18:39 117MFull MSA before JPred filters in FASTA
[ ]jp_8sWPCF4.hmm2015-04-17 18:37 56KHHMer2 profile of the alignment
[TXT]jp_8sWPCF4.html2015-04-17 18:37 341KHTML prediction and alignment data
[ ]jp_8sWPCF4.input2015-04-17 17:22 308 Raw input data for analysis
[ ]jp_8sWPCF4.jalview2015-04-17 18:37 7.0KJalview annotation file for alignment
[ ]jp_8sWPCF4.jnet2015-04-17 18:37 11KJnet secondary structure output
[TXT]jp_8sWPCF4.profile2015-04-17 18:33 48KPSIBLAST profile from alignment
[ ]jp_8sWPCF4.pssm2015-04-17 18:37 65KPSIBLAST PSSM for Jnet
[TXT]jp_8sWPCF4.results.html2016-02-15 12:18 129KJPred results page
[TXT]jp_8sWPCF4.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_8sWPCF4.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_8sWPCF4.seq2015-04-17 17:22 318 Sequence data file
[TXT]jp_8sWPCF4.simple.html2015-04-17 18:37 1.9KBrief HTML: sequence and prediction only
[TXT]jp_8sWPCF4.svg.html2015-04-17 18:39 121KJalview SVG summary of results
[ ]jp_8sWPCF4.tar.gz2015-04-17 18:39 24MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.