JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 15:40 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1u7za_.name2015-04-17 15:30 0 Job name flag file
[ ]jp_C0NNm66.align2015-04-17 15:40 189KPSIBLAST alignment in FASTA format
[TXT]jp_C0NNm66.als2015-04-17 15:40 3.6KAlscript command file for PS/PDF output
[ ]jp_C0NNm66.blast.gz2015-04-17 15:39 5.3MCompressed PSIBLAST output file
[TXT]jp_C0NNm66.coils.csv2015-04-17 15:40 1.3KCOILS output in CSV format
[ ]jp_C0NNm66.coilseq.lupas_142015-04-17 15:40 9.1KCOILS output, window length 14
[ ]jp_C0NNm66.coilseq.lupas_212015-04-17 15:40 9.1KCOILS output, window length 21
[ ]jp_C0NNm66.coilseq.lupas_282015-04-17 15:40 9.1KCOILS output, window length 28
[ ]jp_C0NNm66.concise2015-04-17 15:40 375KPrediction: coiled-coil, solvent, alignment
[ ]jp_C0NNm66.concise.blc2015-04-17 15:40 190KBLC format prediction and alignment data
[ ]jp_C0NNm66.concise.fasta2015-04-17 15:40 192KPrediction: coiled-coil, solvent, alignment
[ ]jp_C0NNm66.concise.pdf2015-04-17 15:40 1.3MPDF prediction and alignment data
[ ]jp_C0NNm66.concise.ps2015-04-17 15:40 23MPrediction: coiled-coil, solvent, alignment
[ ]jp_C0NNm66.fasta2015-04-17 15:33 232 Input query sequence in FASTA format
[ ]jp_C0NNm66.full_MSA.fasta2015-04-17 15:39 13MFull MSA before JPred filters in FASTA
[TXT]jp_C0NNm66.full_MSA.fasta.noGaps.html2015-04-17 15:40 1.3MFull MSA before JPred filters in FASTA
[TXT]jp_C0NNm66.full_MSA.fasta.withGaps.html2015-04-17 15:40 30MFull MSA before JPred filters in FASTA
[ ]jp_C0NNm66.hmm2015-04-17 15:40 41KHHMer2 profile of the alignment
[TXT]jp_C0NNm66.html2015-04-17 15:40 366KHTML prediction and alignment data
[ ]jp_C0NNm66.input2015-04-17 15:30 223 Raw input data for analysis
[ ]jp_C0NNm66.jalview2015-04-17 15:40 5.2KJalview annotation file for alignment
[ ]jp_C0NNm66.jnet2015-04-17 15:40 7.9KJnet secondary structure output
[TXT]jp_C0NNm66.profile2015-04-17 15:38 35KPSIBLAST profile from alignment
[ ]jp_C0NNm66.pssm2015-04-17 15:40 46KPSIBLAST PSSM for Jnet
[TXT]jp_C0NNm66.results.html2016-02-15 12:18 95KJPred results page
[TXT]jp_C0NNm66.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_C0NNm66.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_C0NNm66.seq2015-04-17 15:30 232 Sequence data file
[TXT]jp_C0NNm66.simple.html2015-04-17 15:40 1.7KBrief HTML: sequence and prediction only
[TXT]jp_C0NNm66.svg.html2015-04-17 15:40 87KJalview SVG summary of results
[ ]jp_C0NNm66.tar.gz2015-04-17 15:41 9.7MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.