JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:31 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1unqa_.name2015-04-17 18:34 0 Job name flag file
[ ]jp_nM5itRd.align2015-04-17 21:30 91KPSIBLAST alignment in FASTA format
[TXT]jp_nM5itRd.als2015-04-17 21:30 2.4KAlscript command file for PS/PDF output
[ ]jp_nM5itRd.blast.gz2015-04-17 21:28 8.9MCompressed PSIBLAST output file
[TXT]jp_nM5itRd.coils.csv2015-04-17 21:30 732 COILS output in CSV format
[ ]jp_nM5itRd.coilseq.lupas_142015-04-17 21:30 4.9KCOILS output, window length 14
[ ]jp_nM5itRd.coilseq.lupas_212015-04-17 21:30 4.9KCOILS output, window length 21
[ ]jp_nM5itRd.coilseq.lupas_282015-04-17 21:30 4.9KCOILS output, window length 28
[ ]jp_nM5itRd.concise2015-04-17 21:30 178KPrediction: coiled-coil, solvent, alignment
[ ]jp_nM5itRd.concise.blc2015-04-17 21:30 92KBLC format prediction and alignment data
[ ]jp_nM5itRd.concise.fasta2015-04-17 21:30 92KPrediction: coiled-coil, solvent, alignment
[ ]jp_nM5itRd.concise.pdf2015-04-17 21:31 576KPDF prediction and alignment data
[ ]jp_nM5itRd.concise.ps2015-04-17 21:30 10MPrediction: coiled-coil, solvent, alignment
[ ]jp_nM5itRd.fasta2015-04-17 20:32 131 Input query sequence in FASTA format
[ ]jp_nM5itRd.full_MSA.fasta2015-04-17 21:29 23MFull MSA before JPred filters in FASTA
[TXT]jp_nM5itRd.full_MSA.fasta.noGaps.html2015-04-17 21:31 2.6MFull MSA before JPred filters in FASTA
[TXT]jp_nM5itRd.full_MSA.fasta.withGaps.html2015-04-17 21:31 53MFull MSA before JPred filters in FASTA
[ ]jp_nM5itRd.hmm2015-04-17 21:30 22KHHMer2 profile of the alignment
[TXT]jp_nM5itRd.html2015-04-17 21:30 232KHTML prediction and alignment data
[ ]jp_nM5itRd.input2015-04-17 18:34 124 Raw input data for analysis
[ ]jp_nM5itRd.jalview2015-04-17 21:30 3.1KJalview annotation file for alignment
[ ]jp_nM5itRd.jnet2015-04-17 21:30 4.3KJnet secondary structure output
[TXT]jp_nM5itRd.profile2015-04-17 21:05 19KPSIBLAST profile from alignment
[ ]jp_nM5itRd.pssm2015-04-17 21:30 25KPSIBLAST PSSM for Jnet
[TXT]jp_nM5itRd.results.html2016-02-15 12:18 56KJPred results page
[TXT]jp_nM5itRd.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_nM5itRd.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_nM5itRd.seq2015-04-17 18:34 131 Sequence data file
[TXT]jp_nM5itRd.simple.html2015-04-17 21:30 1.3KBrief HTML: sequence and prediction only
[TXT]jp_nM5itRd.svg.html2015-04-17 21:31 48KJalview SVG summary of results
[ ]jp_nM5itRd.tar.gz2015-04-17 21:32 14MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.