JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 16:04 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1us0a_.name2015-04-17 15:30 0 Job name flag file
[ ]jp_DpGXgfO.align2015-04-17 16:02 296KPSIBLAST alignment in FASTA format
[TXT]jp_DpGXgfO.als2015-04-17 16:02 4.3KAlscript command file for PS/PDF output
[ ]jp_DpGXgfO.blast.gz2015-04-17 15:59 24MCompressed PSIBLAST output file
[TXT]jp_DpGXgfO.coils.csv2015-04-17 16:02 1.9KCOILS output in CSV format
[ ]jp_DpGXgfO.coilseq.lupas_142015-04-17 16:02 13KCOILS output, window length 14
[ ]jp_DpGXgfO.coilseq.lupas_212015-04-17 16:02 13KCOILS output, window length 21
[ ]jp_DpGXgfO.coilseq.lupas_282015-04-17 16:02 13KCOILS output, window length 28
[ ]jp_DpGXgfO.concise2015-04-17 16:02 589KPrediction: coiled-coil, solvent, alignment
[ ]jp_DpGXgfO.concise.blc2015-04-17 16:02 297KBLC format prediction and alignment data
[ ]jp_DpGXgfO.concise.fasta2015-04-17 16:02 300KPrediction: coiled-coil, solvent, alignment
[ ]jp_DpGXgfO.concise.pdf2015-04-17 16:03 2.1MPDF prediction and alignment data
[ ]jp_DpGXgfO.concise.ps2015-04-17 16:02 37MPrediction: coiled-coil, solvent, alignment
[ ]jp_DpGXgfO.fasta2015-04-17 15:34 330 Input query sequence in FASTA format
[ ]jp_DpGXgfO.full_MSA.fasta2015-04-17 16:01 46MFull MSA before JPred filters in FASTA
[TXT]jp_DpGXgfO.full_MSA.fasta.noGaps.html2015-04-17 16:04 4.3MFull MSA before JPred filters in FASTA
[TXT]jp_DpGXgfO.full_MSA.fasta.withGaps.html2015-04-17 16:04 118MFull MSA before JPred filters in FASTA
[ ]jp_DpGXgfO.hmm2015-04-17 16:02 59KHHMer2 profile of the alignment
[TXT]jp_DpGXgfO.html2015-04-17 16:02 495KHTML prediction and alignment data
[ ]jp_DpGXgfO.input2015-04-17 15:30 320 Raw input data for analysis
[ ]jp_DpGXgfO.jalview2015-04-17 16:02 7.1KJalview annotation file for alignment
[ ]jp_DpGXgfO.jnet2015-04-17 16:02 11KJnet secondary structure output
[TXT]jp_DpGXgfO.profile2015-04-17 15:56 50KPSIBLAST profile from alignment
[ ]jp_DpGXgfO.pssm2015-04-17 16:02 67KPSIBLAST PSSM for Jnet
[TXT]jp_DpGXgfO.results.html2016-02-15 12:18 135KJPred results page
[TXT]jp_DpGXgfO.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_DpGXgfO.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_DpGXgfO.seq2015-04-17 15:30 330 Sequence data file
[TXT]jp_DpGXgfO.simple.html2015-04-17 16:02 2.0KBrief HTML: sequence and prediction only
[TXT]jp_DpGXgfO.svg.html2015-04-17 16:04 126KJalview SVG summary of results
[ ]jp_DpGXgfO.tar.gz2015-04-17 16:04 38MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.