JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 21:39 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1usub_.name2015-04-17 19:12 0 Job name flag file
[ ]jp_FuHUTaT.align2015-04-17 21:38 64KPSIBLAST alignment in FASTA format
[TXT]jp_FuHUTaT.als2015-04-17 21:38 2.2KAlscript command file for PS/PDF output
[ ]jp_FuHUTaT.blast.gz2015-04-17 21:38 302KCompressed PSIBLAST output file
[TXT]jp_FuHUTaT.coils.csv2015-04-17 21:38 822 COILS output in CSV format
[ ]jp_FuHUTaT.coilseq.lupas_142015-04-17 21:38 5.5KCOILS output, window length 14
[ ]jp_FuHUTaT.coilseq.lupas_212015-04-17 21:38 5.5KCOILS output, window length 21
[ ]jp_FuHUTaT.coilseq.lupas_282015-04-17 21:38 5.5KCOILS output, window length 28
[ ]jp_FuHUTaT.concise2015-04-17 21:38 129KPrediction: coiled-coil, solvent, alignment
[ ]jp_FuHUTaT.concise.blc2015-04-17 21:38 66KBLC format prediction and alignment data
[ ]jp_FuHUTaT.concise.fasta2015-04-17 21:38 66KPrediction: coiled-coil, solvent, alignment
[ ]jp_FuHUTaT.concise.pdf2015-04-17 21:39 432KPDF prediction and alignment data
[ ]jp_FuHUTaT.concise.ps2015-04-17 21:38 7.7MPrediction: coiled-coil, solvent, alignment
[ ]jp_FuHUTaT.fasta2015-04-17 21:35 146 Input query sequence in FASTA format
[ ]jp_FuHUTaT.full_MSA.fasta2015-04-17 21:38 608KFull MSA before JPred filters in FASTA
[TXT]jp_FuHUTaT.full_MSA.fasta.noGaps.html2015-04-17 21:39 168KFull MSA before JPred filters in FASTA
[TXT]jp_FuHUTaT.full_MSA.fasta.withGaps.html2015-04-17 21:39 2.1MFull MSA before JPred filters in FASTA
[ ]jp_FuHUTaT.hmm2015-04-17 21:38 25KHHMer2 profile of the alignment
[TXT]jp_FuHUTaT.html2015-04-17 21:38 163KHTML prediction and alignment data
[ ]jp_FuHUTaT.input2015-04-17 19:12 139 Raw input data for analysis
[ ]jp_FuHUTaT.jalview2015-04-17 21:38 3.5KJalview annotation file for alignment
[ ]jp_FuHUTaT.jnet2015-04-17 21:38 4.9KJnet secondary structure output
[TXT]jp_FuHUTaT.profile2015-04-17 21:37 21KPSIBLAST profile from alignment
[ ]jp_FuHUTaT.pssm2015-04-17 21:38 28KPSIBLAST PSSM for Jnet
[TXT]jp_FuHUTaT.results.html2016-02-15 12:18 61KJPred results page
[TXT]jp_FuHUTaT.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_FuHUTaT.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_FuHUTaT.seq2015-04-17 19:12 146 Sequence data file
[TXT]jp_FuHUTaT.simple.html2015-04-17 21:38 1.3KBrief HTML: sequence and prediction only
[TXT]jp_FuHUTaT.svg.html2015-04-17 21:39 53KJalview SVG summary of results
[ ]jp_FuHUTaT.tar.gz2015-04-17 21:39 1.0MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.