JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

Home
REST API
About
F.A.Q.
Help & Tutorials
Monitoring
Contact
Publications
 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 19:38 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1uuya_.name2015-04-17 17:58 0 Job name flag file
[ ]jp_Yde00Ww.align2015-04-17 19:37 149KPSIBLAST alignment in FASTA format
[TXT]jp_Yde00Ww.als2015-04-17 19:37 2.9KAlscript command file for PS/PDF output
[ ]jp_Yde00Ww.blast.gz2015-04-17 19:36 4.4MCompressed PSIBLAST output file
[TXT]jp_Yde00Ww.coils.csv2015-04-17 19:37 1.0KCOILS output in CSV format
[ ]jp_Yde00Ww.coilseq.lupas_142015-04-17 19:37 6.8KCOILS output, window length 14
[ ]jp_Yde00Ww.coilseq.lupas_212015-04-17 19:37 6.8KCOILS output, window length 21
[ ]jp_Yde00Ww.coilseq.lupas_282015-04-17 19:37 6.8KCOILS output, window length 28
[ ]jp_Yde00Ww.concise2015-04-17 19:37 292KPrediction: coiled-coil, solvent, alignment
[ ]jp_Yde00Ww.concise.blc2015-04-17 19:37 149KBLC format prediction and alignment data
[ ]jp_Yde00Ww.concise.fasta2015-04-17 19:37 150KPrediction: coiled-coil, solvent, alignment
[ ]jp_Yde00Ww.concise.pdf2015-04-17 19:37 1.0MPDF prediction and alignment data
[ ]jp_Yde00Ww.concise.ps2015-04-17 19:37 18MPrediction: coiled-coil, solvent, alignment
[ ]jp_Yde00Ww.fasta2015-04-17 19:32 176 Input query sequence in FASTA format
[ ]jp_Yde00Ww.full_MSA.fasta2015-04-17 19:36 11MFull MSA before JPred filters in FASTA
[TXT]jp_Yde00Ww.full_MSA.fasta.noGaps.html2015-04-17 19:37 1.8MFull MSA before JPred filters in FASTA
[TXT]jp_Yde00Ww.full_MSA.fasta.withGaps.html2015-04-17 19:37 33MFull MSA before JPred filters in FASTA
[ ]jp_Yde00Ww.hmm2015-04-17 19:37 30KHHMer2 profile of the alignment
[TXT]jp_Yde00Ww.html2015-04-17 19:37 325KHTML prediction and alignment data
[ ]jp_Yde00Ww.input2015-04-17 17:58 168 Raw input data for analysis
[ ]jp_Yde00Ww.jalview2015-04-17 19:37 4.1KJalview annotation file for alignment
[ ]jp_Yde00Ww.jnet2015-04-17 19:37 5.9KJnet secondary structure output
[TXT]jp_Yde00Ww.profile2015-04-17 19:35 26KPSIBLAST profile from alignment
[ ]jp_Yde00Ww.pssm2015-04-17 19:37 35KPSIBLAST PSSM for Jnet
[TXT]jp_Yde00Ww.results.html2016-02-15 12:18 75KJPred results page
[TXT]jp_Yde00Ww.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Yde00Ww.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Yde00Ww.seq2015-04-17 17:58 176 Sequence data file
[TXT]jp_Yde00Ww.simple.html2015-04-17 19:37 1.5KBrief HTML: sequence and prediction only
[TXT]jp_Yde00Ww.svg.html2015-04-17 19:38 66KJalview SVG summary of results
[ ]jp_Yde00Ww.tar.gz2015-04-17 19:38 8.9MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.