JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[TXT]LOG2015-04-17 20:39 4.7KJPred server log file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]d1uwka_.name2015-04-17 18:35 0 Job name flag file
[ ]jp_Z_MC7oa.align2015-04-17 20:38 205KPSIBLAST alignment in FASTA format
[TXT]jp_Z_MC7oa.als2015-04-17 20:38 7.7KAlscript command file for PS/PDF output
[ ]jp_Z_MC7oa.blast.gz2015-04-17 20:38 1.7MCompressed PSIBLAST output file
[TXT]jp_Z_MC7oa.coils.csv2015-04-17 20:38 3.3KCOILS output in CSV format
[ ]jp_Z_MC7oa.coilseq.lupas_142015-04-17 20:38 23KCOILS output, window length 14
[ ]jp_Z_MC7oa.coilseq.lupas_212015-04-17 20:38 23KCOILS output, window length 21
[ ]jp_Z_MC7oa.coilseq.lupas_282015-04-17 20:38 23KCOILS output, window length 28
[ ]jp_Z_MC7oa.concise2015-04-17 20:38 424KPrediction: coiled-coil, solvent, alignment
[ ]jp_Z_MC7oa.concise.blc2015-04-17 20:38 210KBLC format prediction and alignment data
[ ]jp_Z_MC7oa.concise.fasta2015-04-17 20:38 210KPrediction: coiled-coil, solvent, alignment
[ ]jp_Z_MC7oa.concise.pdf2015-04-17 20:39 1.4MPDF prediction and alignment data
[ ]jp_Z_MC7oa.concise.ps2015-04-17 20:38 26MPrediction: coiled-coil, solvent, alignment
[ ]jp_Z_MC7oa.fasta2015-04-17 20:32 574 Input query sequence in FASTA format
[ ]jp_Z_MC7oa.full_MSA.fasta2015-04-17 20:38 2.4MFull MSA before JPred filters in FASTA
[TXT]jp_Z_MC7oa.full_MSA.fasta.noGaps.html2015-04-17 20:39 956KFull MSA before JPred filters in FASTA
[TXT]jp_Z_MC7oa.full_MSA.fasta.withGaps.html2015-04-17 20:39 7.3MFull MSA before JPred filters in FASTA
[ ]jp_Z_MC7oa.hmm2015-04-17 20:38 104KHHMer2 profile of the alignment
[TXT]jp_Z_MC7oa.html2015-04-17 20:38 327KHTML prediction and alignment data
[ ]jp_Z_MC7oa.input2015-04-17 18:35 561 Raw input data for analysis
[ ]jp_Z_MC7oa.jalview2015-04-17 20:38 12KJalview annotation file for alignment
[ ]jp_Z_MC7oa.jnet2015-04-17 20:38 20KJnet secondary structure output
[TXT]jp_Z_MC7oa.profile2015-04-17 20:36 88KPSIBLAST profile from alignment
[ ]jp_Z_MC7oa.pssm2015-04-17 20:38 119KPSIBLAST PSSM for Jnet
[TXT]jp_Z_MC7oa.results.html2016-02-15 12:18 234KJPred results page
[TXT]jp_Z_MC7oa.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Z_MC7oa.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[ ]jp_Z_MC7oa.seq2015-04-17 18:35 574 Sequence data file
[TXT]jp_Z_MC7oa.simple.html2015-04-17 20:38 3.1KBrief HTML: sequence and prediction only
[TXT]jp_Z_MC7oa.svg.html2015-04-17 20:39 226KJalview SVG summary of results
[ ]jp_Z_MC7oa.tar.gz2015-04-17 20:39 4.2MArchive containing complete results
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.