JPred: A Protein Secondary Structure Prediction Server

A Protein Secondary Structure Prediction Server

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 NameLast modifiedSizeDescription
[ ]jp_Anc4j47.tar.gz2015-04-17 17:37 9.4MArchive containing complete results
[TXT]jp_Anc4j47.svg.html2015-04-17 17:37 72KJalview SVG summary of results
[TXT]jp_Anc4j47.simple.html2015-04-17 17:37 1.5KBrief HTML: sequence and prediction only
[ ]jp_Anc4j47.seq2015-04-17 16:45 191 Sequence data file
[TXT]jp_Anc4j47.results_jalview_app.html2016-02-24 17:17 16KHTML prediction and alignment data
[TXT]jp_Anc4j47.results_jalview.html2016-02-24 17:17 13KJalview results options
[TXT]jp_Anc4j47.results.html2016-02-15 12:18 80KJPred results page
[ ]jp_Anc4j47.pssm2015-04-17 17:37 38KPSIBLAST PSSM for Jnet
[TXT]jp_Anc4j47.profile2015-04-17 17:35 28KPSIBLAST profile from alignment
[ ]jp_Anc4j47.jnet2015-04-17 17:37 6.5KJnet secondary structure output
[ ]jp_Anc4j47.jalview2015-04-17 17:37 4.3KJalview annotation file for alignment
[ ]jp_Anc4j47.input2015-04-17 16:45 183 Raw input data for analysis
[TXT]jp_Anc4j47.html2015-04-17 17:37 434KHTML prediction and alignment data
[ ]jp_Anc4j47.hmm2015-04-17 17:37 33KHHMer2 profile of the alignment
[TXT]jp_Anc4j47.full_MSA.fasta.withGaps.html2015-04-17 17:37 23MFull MSA before JPred filters in FASTA
[TXT]jp_Anc4j47.full_MSA.fasta.noGaps.html2015-04-17 17:37 1.5MFull MSA before JPred filters in FASTA
[ ]jp_Anc4j47.full_MSA.fasta2015-04-17 17:36 7.8MFull MSA before JPred filters in FASTA
[ ]jp_Anc4j47.fasta2015-04-17 17:31 191 Input query sequence in FASTA format
[ ]jp_Anc4j47.concise.ps2015-04-17 17:37 26MPrediction: coiled-coil, solvent, alignment
[ ]jp_Anc4j47.concise.pdf2015-04-17 17:37 1.5MPDF prediction and alignment data
[ ]jp_Anc4j47.concise.fasta2015-04-17 17:37 212KPrediction: coiled-coil, solvent, alignment
[ ]jp_Anc4j47.concise.blc2015-04-17 17:37 210KBLC format prediction and alignment data
[ ]jp_Anc4j47.concise2015-04-17 17:37 412KPrediction: coiled-coil, solvent, alignment
[ ]jp_Anc4j47.coilseq.lupas_282015-04-17 17:37 7.4KCOILS output, window length 28
[ ]jp_Anc4j47.coilseq.lupas_212015-04-17 17:37 7.4KCOILS output, window length 21
[ ]jp_Anc4j47.coilseq.lupas_142015-04-17 17:37 7.4KCOILS output, window length 14
[TXT]jp_Anc4j47.coils.csv2015-04-17 17:37 1.1KCOILS output in CSV format
[ ]jp_Anc4j47.blast.gz2015-04-17 17:35 4.8MCompressed PSIBLAST output file
[TXT]jp_Anc4j47.als2015-04-17 17:37 3.3KAlscript command file for PS/PDF output
[ ]jp_Anc4j47.align2015-04-17 17:37 211KPSIBLAST alignment in FASTA format
[TXT]d1uz5a2.name2015-04-17 16:45 0 Job name flag file
[TXT]README2016-02-15 12:18 2.1KResults file descriptions
[TXT]LOG2015-04-17 17:37 4.7KJPred server log file
Primary citation: Drozdetskiy A, Cole C, Procter J & Barton GJ. Nucl. Acids Res.
(first published online April 16, 2015) doi: 10.1093/nar/gkv332 [link]
More citations: link.
.